Basic Information:

  VIRBase ID:  

VHID00635211

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-4-5p:  MIMAT0001567          Vps41:  NM_172120     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-4-5p	Vps41
miRBase Accession/Entrez ID	MIMAT0001567	218035
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	AI317346//mVa//mVam2//Va//Vam2

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Vps41	chr13:18723190-18723191(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr13:18739458-18739459(+) m6A CDS       25683224//25456834//24981863//25412662//25569111 chr13:18739464-18739465(+) m6A CDS       25683224//25456834//24981863//25412662//25569111 chr13:18745276-18745277(+) m6A CDS       24981863//25569111 chr13:18745316-18745317(+) m6A CDS       25569111 chr13:18782662-18782663(+) m6A CDS       22608085 chr13:18782690-18782691(+) m6A CDS       22608085 chr13:18791628-18791629(+) m6A CDS       22608085 chr13:18848997-18848998(+) m6A CDS       22608085 chr13:18852365-18852366(+) m6A CDS       22608085 chr13:18852379-18852380(+) m6A CDS       22608085 chr13:18853358-18853359(+) m6A CDS       22608085 chr13:18866159-18866160(+) m6A CDS       24981863 chr13:18866249-18866250(+) m6A 3'UTR       24981863//25569111//22608085 chr13:18866332-18866333(+) m6A 3'UTR       24981863//25569111 chr13:18866505-18866506(+) m6A 3'UTR       25456834//24981863//25569111//26404942//22608085//22575960 chr13:18866520-18866521(+) m6A 3'UTR       25456834//24981863//25569111//26404942//22608085//22575960 chr13:18866660-18866661(+) m6A 3'UTR       25456834//24981863//25569111//22608085 chr13:18866690-18866691(+) m6A 3'UTR       25456834//24981863//25569111//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Vps41	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-4-5p
Interactor2: Vps41

Evidence Support:

Prediction-Evidence	Rep
Support Database	RepTar