Basic Information:

  VIRBase ID:  

VHID00635175

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-4-5p:  MIMAT0001567          Tdp1:  NM_001379072     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-4-5p	Tdp1
miRBase Accession/Entrez ID	MIMAT0001567	104884
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	2810481F14Rik//4921509N21Rik//AI838772//AW493413//E430034L06Rik//Gm40556//MLZ-501//SC//SCAN1

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Tdp1	chr12:99891213-99891214(+) m6A CDS//exon       25412662//24981863//25569111 chr12:99891254-99891255(+) m6A CDS//exon       25412662//24981863//25569111 chr12:99891356-99891357(+) m6A CDS//exon       25683224//25412662//24981863//25569111 chr12:99891388-99891389(+) m6A CDS//exon       25683224//25412662//24981863//25569111 chr12:99891494-99891495(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111 chr12:99891527-99891528(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111 chr12:99891624-99891625(+) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085 chr12:99891643-99891644(+) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085 chr12:99891652-99891653(+) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085 chr12:99891670-99891671(+) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085 chr12:99893640-99893641(+) m6A CDS//exon       25456834//24981863//25569111 chr12:99894740-99894741(+) Y CDS//exon       26075521 chr12:99911715-99911716(+) m6A CDS//exon       - chr12:99955045-99955046(+) m6A 3'UTR//exon       - chr12:99955082-99955083(+) m6A 3'UTR//exon       -

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-4-5p
Interactor2: Tdp1

Evidence Support:

Prediction-Evidence	Rep
Support Database	RepTar