Detail Information

Basic Information:


  VIRBase ID:  

VHID00635146

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-4-5p:           Metap1:      

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Interactor Information:


Interactor1 Interactor2
Symbol mghv-miR-M1-4-5p Metap1
miRBase
Accession/Entrez ID
MIMAT0001567 75624
Organism Murid gammaherpesvirus 4 (MuHV-4) Mus musculus
Category miRNA mRNA
Alias - 1700029C17Rik//AW047992//mKIAA0094

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Metap1
chr3:138459679-138459680(-) m6A 3'UTR       24981863//25569111//22608085
chr3:138459709-138459710(-) m6A 3'UTR       24981863//25569111//22608085
chr3:138459725-138459726(-) m6A 3'UTR       24981863//25569111//22608085
chr3:138459781-138459782(-) m6A 3'UTR       24981863//25569111
chr3:138459879-138459880(-) m6A 3'UTR       24981863//26404942
chr3:138459976-138459977(-) m6A 3'UTR       24981863//25569111
chr3:138460034-138460035(-) m6A 3'UTR       25456834//24981863//25569111
chr3:138460152-138460153(-) m6A 3'UTR       25456834//24981863//25569111
chr3:138460216-138460217(-) m6A 3'UTR       25683224//25456834//24981863//25569111
chr3:138460309-138460310(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085
chr3:138460375-138460376(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085
chr3:138460403-138460404(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085
chr3:138460464-138460465(-) m6A CDS       25683224//25456834//24981863//25569111//22608085
chr3:138460482-138460483(-) m6A CDS       25683224//25456834//24981863//25569111
chr3:138466260-138466261(-) m6A CDS//intron       25569111//22608085
chr3:138466320-138466321(-) m6A CDS//exon//intron       25569111//22608085
chr3:138466333-138466334(-) m6A CDS//exon//intron       25569111//22608085
chr3:138466341-138466342(-) m6A CDS//exon//intron       25569111//22608085
chr3:138481562-138481563(-) m6A exon//intron       24981863//22608085

Interaction Network (The top 100 interactions):


Interactor1: mghv-miR-M1-4-5p
Interactor2: Metap1

Evidence Support:


Prediction-Evidence Rep
Support Database RepTar

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