Basic Information:

  VIRBase ID:  

VHID00634854

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-3-3p:  MIMAT0001566          Tmed8:  NM_001033475     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-3-3p	Tmed8
miRBase Accession/Entrez ID	MIMAT0001566	382620
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	6430595O10Rik//AI447224//Gm1184//Mem1

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Tmed8	chr12:87167668-87167669(-) m6A 3'UTR       24981863 chr12:87167711-87167712(-) m6A 3'UTR       24981863//25569111 chr12:87167734-87167735(-) m6A 3'UTR       24981863//25569111 chr12:87168802-87168803(-) m6A 3'UTR       22608085 chr12:87168821-87168822(-) m6A 3'UTR       22608085 chr12:87168831-87168832(-) m6A 3'UTR       22608085 chr12:87170355-87170356(-) m6A 3'UTR       25456834//24981863//22608085 chr12:87170435-87170436(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr12:87170500-87170501(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr12:87170536-87170537(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr12:87170704-87170705(-) m6A 3'UTR       24981863//22608085 chr12:87170897-87170898(-) m6A 3'UTR       25683224//24981863//25569111 chr12:87170973-87170974(-) m6A 3'UTR       25683224//25456834//24981863 chr12:87171492-87171493(-) m6A 3'UTR       24981863//22608085 chr12:87172048-87172049(-) m6A 3'UTR       25683224//25456834//24981863 chr12:87172116-87172117(-) m6A 3'UTR       25683224//25456834//24981863 chr12:87172182-87172183(-) m6A 3'UTR       25683224//25456834//24981863 chr12:87172445-87172446(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr12:87172543-87172544(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr12:87174137-87174138(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr12:87174268-87174269(-) m6A CDS       25683224//25456834//24981863 chr12:87174317-87174318(-) m6A CDS       25683224//25456834//25412662//24981863 chr12:87174551-87174552(-) m6A CDS       25683224//25412662 chr12:87174578-87174579(-) m6A CDS       25683224//25412662 chr12:87174632-87174633(-) m6A CDS       25683224 chr12:87200123-87200124(-) m6A CDS       25412662 chr12:87200195-87200196(-) m6A CDS       25412662

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Tmed8	Cytoplasm Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-3-3p
Interactor2: Tmed8

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar