Basic Information:

  VIRBase ID:  

VHID00634846

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-3-3p:  MIMAT0001566          Rbm33:  NM_028234     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-3-3p	Rbm33
miRBase Accession/Entrez ID	MIMAT0001566	381626
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	3200001K10Rik//6430512A10Rik//AA386890//P//Prr8

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Rbm33	chr5:28317230-28317231(+) m6A 5'UTR       25412662//25569111 chr5:28317361-28317362(+) m6A 5'UTR       25412662//25569111 chr5:28331179-28331180(+) m6A CDS       25683224//25412662//25569111//22608085 chr5:28331185-28331186(+) m6A CDS       25683224//25412662//24981863//25569111//22608085 chr5:28335824-28335825(+) m6A CDS       25683224//25412662//24981863//25569111//22608085 chr5:28337026-28337027(+) Y CDS//exon       26075521 chr5:28339085-28339086(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr5:28339103-28339104(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr5:28339133-28339134(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr5:28339142-28339143(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr5:28339148-28339149(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr5:28339178-28339179(+) m6A CDS       25683224//25456834//24981863//25569111 chr5:28339213-28339214(+) m6A CDS       25683224//25456834//24981863//25569111 chr5:28339273-28339274(+) m6A CDS       25683224//25456834//24981863//25569111 chr5:28339289-28339290(+) m6A CDS       25683224//25456834//24981863//25569111 chr5:28342449-28342450(+) m6A CDS//intron       25683224//24981863 chr5:28342505-28342506(+) m6A CDS//intron       25683224//24981863 chr5:28352483-28352484(+) m6A CDS       25683224//25456834//24981863 chr5:28352491-28352492(+) m6A CDS       25683224//25456834//24981863 chr5:28352502-28352503(+) m6A CDS       25683224//25456834//24981863 chr5:28352567-28352568(+) m6A CDS       25683224//25456834//24981863//25412662//25569111 chr5:28352585-28352586(+) m6A CDS       25683224//25456834//24981863//25412662//25569111 chr5:28352625-28352626(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr5:28352636-28352637(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr5:28355527-28355528(+) m6A 3'UTR//intron       25569111 chr5:28355565-28355566(+) m6A 3'UTR//intron       25412662//24981863//25569111 chr5:28358334-28358335(+) m6A CDS       25412662//24981863//25569111 chr5:28358402-28358403(+) m6A CDS       25412662//24981863 chr5:28358414-28358415(+) m6A CDS       25412662//24981863 chr5:28362131-28362132(+) m6A CDS       25412662//24981863 chr5:28362183-28362184(+) m6A CDS       25412662//24981863//22608085 chr5:28362212-28362213(+) m6A CDS       24981863//22608085 chr5:28386518-28386519(+) m6A CDS       25683224//24981863//22608085 chr5:28386551-28386552(+) m6A CDS       25683224//25412662//24981863//22608085 chr5:28386565-28386566(+) m6A CDS       25683224//25412662//24981863//22608085 chr5:28386601-28386602(+) m6A CDS       25683224//25412662//24981863 chr5:28387656-28387657(+) m6A CDS       25683224//25412662//24981863 chr5:28387686-28387687(+) m6A CDS       25683224//25412662//24981863 chr5:28387730-28387731(+) m6A CDS       25683224//24981863 chr5:28387782-28387783(+) m6A CDS       24981863 chr5:28387803-28387804(+) m6A CDS       24981863 chr5:28387839-28387840(+) m6A CDS       24981863 chr5:28387926-28387927(+) m6A CDS       25683224//25412662//24981863 chr5:28387950-28387951(+) m6A CDS       25683224//25412662//24981863 chr5:28389504-28389505(+) m6A CDS       25683224//25412662//24981863 chr5:28389754-28389755(+) m6A CDS       25683224//25412662//24981863 chr5:28391158-28391159(+) m6A CDS       24981863 chr5:28394022-28394023(+) m6A CDS       24981863 chr5:28394090-28394091(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr5:28394229-28394230(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr5:28394240-28394241(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr5:28394249-28394250(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr5:28394328-28394329(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr5:28394333-28394334(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr5:28394347-28394348(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr5:28394353-28394354(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr5:28394389-28394390(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr5:28394438-28394439(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr5:28394486-28394487(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr5:28394505-28394506(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr5:28394560-28394561(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr5:28394583-28394584(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr5:28408318-28408319(+) m6A CDS       25683224//25412662//24981863//25569111 chr5:28408325-28408326(+) m6A CDS       25683224//25412662//24981863//25569111 chr5:28413784-28413785(+) m6A 3'UTR       25683224//25456834//24981863//25569111 chr5:28413792-28413793(+) m6A 3'UTR       25683224//25456834//24981863//25569111 chr5:28413845-28413846(+) m6A 3'UTR       25683224//25456834//24981863//25569111 chr5:28413893-28413894(+) m6A 3'UTR       25683224//25456834//24981863//25569111 chr5:28414788-28414789(+) m6A 3'UTR       24981863//22608085 chr5:28415060-28415061(+) m6A 3'UTR       - chr5:28415219-28415220(+) m6A 3'UTR       - chr5:28415539-28415540(+) Y 3'UTR//exon       26075521 chr5:28419078-28419079(+) Y 3'UTR//exon       26075521

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-3-3p
Interactor2: Rbm33

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar