Basic Information:

  VIRBase ID:  

VHID00634798

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-3-3p:  MIMAT0001566          Dixdc1:  NM_001311069     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-3-3p	Dixdc1
miRBase Accession/Entrez ID	MIMAT0001566	330938
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	4930563F16Rik//BC048182//Ccd1//Ccd1Aalpha1L//Ccd1Abeta1L//Ccd1BalphaL//Ccd1BbetaL//Ccd1CL//mKIAA1735

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Dixdc1	chr9:50663119-50663120(-) m6A 3'UTR//exon       22608085 chr9:50663165-50663166(-) m6A 3'UTR//exon       24981863//22608085 chr9:50663213-50663214(-) m6A 3'UTR//exon       24981863//22608085 chr9:50664920-50664921(-) m6A 3'UTR//exon       24981863//22608085 chr9:50664969-50664970(-) m6A 3'UTR//exon       24981863//22608085 chr9:50665008-50665009(-) m6A 3'UTR//exon       24981863//25456834//22608085 chr9:50665028-50665029(-) m6A 3'UTR//exon       24981863//25456834//22608085 chr9:50665041-50665042(-) m6A 3'UTR//exon       24981863//25456834//22608085 chr9:50665260-50665261(-) m6A 3'UTR//exon       24981863//25569111//22608085 chr9:50665269-50665270(-) m6A 3'UTR//exon       24981863//25569111//22608085 chr9:50665276-50665277(-) m6A 3'UTR//exon       24981863//25569111//22608085 chr9:50665392-50665393(-) m6A 3'UTR//exon       25456834//24981863//25569111//22608085 chr9:50665418-50665419(-) m6A 3'UTR//exon       25456834//24981863//25569111//22608085 chr9:50665456-50665457(-) m6A 3'UTR//exon       25456834//24981863//25569111//22608085 chr9:50665492-50665493(-) m6A 3'UTR//exon       25456834//24981863//25569111//22608085//22575960 chr9:50665500-50665501(-) m6A 3'UTR//exon       25456834//24981863//25569111//22608085//22575960 chr9:50665535-50665536(-) m6A 3'UTR//exon       25456834//24981863//25569111//22608085//22575960 chr9:50665555-50665556(-) m6A 3'UTR//exon       25456834//24981863//25569111//22608085//22575960 chr9:50665628-50665629(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085//22575960 chr9:50665640-50665641(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085//22575960 chr9:50665712-50665713(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr9:50665761-50665762(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr9:50665770-50665771(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr9:50665881-50665882(-) m6A 3'UTR//exon       25456834//25412662//24981863//25569111//22608085 chr9:50665949-50665950(-) m6A 3'UTR//exon       25456834//25412662//24981863//25569111//22608085 chr9:50665956-50665957(-) m6A 3'UTR//exon       25456834//25412662//24981863//25569111//22608085 chr9:50665980-50665981(-) m6A 3'UTR//exon       25456834//25412662//24981863//25569111//22608085 chr9:50666021-50666022(-) m6A 3'UTR//exon       25456834//25412662//24981863//25569111//22608085 chr9:50666150-50666151(-) m6A 3'UTR//exon       25412662//24981863//25569111//22608085 chr9:50666189-50666190(-) m6A 3'UTR//exon       25412662//24981863//25569111 chr9:50666210-50666211(-) m6A CDS//exon       25412662//24981863//25569111 chr9:50682044-50682045(-) m6A CDS//exon       25412662//22608085 chr9:50682055-50682056(-) m6A CDS//exon       25412662//22608085 chr9:50682193-50682194(-) m6A CDS//exon       25412662//22608085 chr9:50683732-50683733(-) m6A CDS//exon       25412662//22608085 chr9:50683897-50683898(-) m6A CDS//exon       25412662//22608085 chr9:50683946-50683947(-) m6A CDS//exon       25412662 chr9:50693548-50693549(-) m6A CDS//exon       24981863 chr9:50693593-50693594(-) m6A CDS//exon       25412662//24981863 chr9:50693614-50693615(-) m6A CDS//exon       25412662//24981863 chr9:50693640-50693641(-) m6A CDS//exon       25412662 chr9:50693656-50693657(-) m6A CDS//exon       25412662 chr9:50693663-50693664(-) m6A CDS//exon       25412662 chr9:50693681-50693682(-) m6A CDS//exon       25412662 chr9:50693717-50693718(-) m6A CDS//intron       25412662//22608085 chr9:50693768-50693769(-) m6A 5'UTR//intron       25412662//22608085 chr9:50698816-50698817(-) m6A exon//intron       24981863 chr9:50698904-50698905(-) m6A exon//intron       24981863 chr9:50699010-50699011(-) m6A exon//intron       24981863//22608085 chr9:50699275-50699276(-) m6A exon//intron       24981863//22608085 chr9:50701997-50701998(-) m6A CDS       25412662 chr9:50703126-50703127(-) m6A CDS       25412662//22608085 chr9:50703253-50703254(-) m6A CDS       25412662//22608085 chr9:50703272-50703273(-) m6A CDS       25412662//22608085 chr9:50727942-50727943(-) m6A 5'UTR//intron       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Dixdc1	Cytoplasm Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-3-3p
Interactor2: Dixdc1

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar