Detail Information

Basic Information:


  VIRBase ID:  

VHID00634774

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-3-3p:           Hecw2:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol mghv-miR-M1-3-3p Hecw2
miRBase
Accession/Entrez ID		 MIMAT0001566 329152
Organism Murid gammaherpesvirus 4 (MuHV-4) Mus musculus
Category miRNA mRNA
Alias - A730039N16Rik//D030049F17Rik//Gm971//mKIAA1301//Ned//Nedl2

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Hecw2
chr1:53812666-53812667(-) m6A 3'UTR       24981863
chr1:53812684-53812685(-) m6A 3'UTR       24981863
chr1:53812853-53812854(-) m6A 3'UTR       25456834//24981863//25569111//22608085
chr1:53812882-53812883(-) m6A 3'UTR       25456834//24981863//25569111//22608085
chr1:53812900-53812901(-) m6A 3'UTR       25456834//24981863//25569111//22608085
chr1:53812921-53812922(-) m6A 3'UTR       25456834//24981863//25569111//22608085
chr1:53812936-53812937(-) m6A 3'UTR       25456834//24981863//25569111//22608085
chr1:53812976-53812977(-) m6A 3'UTR       25456834//24981863//25569111//22608085
chr1:53813017-53813018(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085
chr1:53813068-53813069(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085
chr1:53813090-53813091(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085
chr1:53813111-53813112(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr1:53813154-53813155(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr1:53813230-53813231(-) m6A CDS       25683224//25456834//24981863//25569111//22608085
chr1:53813244-53813245(-) m6A CDS       25683224//25456834//24981863//25569111//22608085
chr1:53813266-53813267(-) m6A CDS       25683224//25456834//24981863//25569111//22608085
chr1:53840810-53840811(-) Y CDS//exon       26075521
chr1:53925654-53925655(-) m6A CDS       25412662//24981863//25569111//22608085
chr1:53925693-53925694(-) m6A CDS       25412662//24981863//25569111//22608085
chr1:53925740-53925741(-) m6A CDS       25412662//24981863//25569111//22608085
chr1:53925772-53925773(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085
chr1:53925801-53925802(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085
chr1:53925820-53925821(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085
chr1:53925825-53925826(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085
chr1:53925847-53925848(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085
chr1:53925860-53925861(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085
chr1:53925873-53925874(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085
chr1:53925983-53925984(-) m6A CDS       24981863//25569111
chr1:53926098-53926099(-) m6A CDS       24981863//25569111//22608085
chr1:53926147-53926148(-) m6A CDS       25412662//24981863//25569111//22608085
chr1:53926152-53926153(-) m6A CDS       25412662//24981863//25569111//22608085
chr1:53926244-53926245(-) m6A CDS       25683224//25412662//24981863//25569111//22608085
chr1:53926262-53926263(-) m6A CDS       25683224//25412662//24981863//25569111//22608085
chr1:53926300-53926301(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085
chr1:53926330-53926331(-) m6A CDS       25456834//25412662//24981863//25569111//22608085
chr1:53926396-53926397(-) m6A CDS       25456834//25412662//24981863//25569111//22608085
chr1:53926475-53926476(-) m6A CDS       25683224//25412662//24981863//25569111//22608085//22575960
chr1:53926506-53926507(-) m6A CDS       25683224//25412662//24981863//25569111//22608085//22575960
chr1:53926544-53926545(-) m6A CDS       25683224//25412662//24981863//25569111//22608085//22575960
chr1:53926628-53926629(-) m6A CDS       25412662//24981863//25569111//22608085
chr1:54040250-54040251(-) m6A CDS//exon       25569111
chr1:54040268-54040269(-) m6A CDS//exon       25569111
chr1:54040373-54040374(-) m6A CDS//exon       24981863//25569111
chr1:54040388-54040389(-) m6A CDS//exon       24981863//25569111
chr1:54040412-54040413(-) m6A CDS//exon       24981863//25569111

Interaction Network (The top 100 interactions):


Interactor1: mghv-miR-M1-3-3p
Interactor2: Hecw2

Evidence Support:


Prediction-Evidence cRep
Support Database RepTar

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