Basic Information:

  VIRBase ID:  

VHID00634742

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-3-3p:  MIMAT0001566          Cachd1:  NM_198037     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-3-3p	Cachd1
miRBase Accession/Entrez ID	MIMAT0001566	320508
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	1190007F10Rik//AI852726//B430218L07Rik//mKIAA1573//Vwcd//Vwcd1

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Cachd1	chr4:100776717-100776718(+) m6A 5'UTR       25412662//24981863 chr4:100776776-100776777(+) m6A 5'UTR       25412662//24981863//25569111 chr4:100776802-100776803(+) m6A 5'UTR       25412662//24981863//25569111 chr4:100776867-100776868(+) m6A 5'UTR       25412662//25569111 chr4:100777155-100777156(+) m6A CDS       25412662 chr4:100897774-100897775(+) m6A CDS       25683224//22608085 chr4:100918052-100918053(+) m6A CDS       25683224//22608085 chr4:100918075-100918076(+) m6A CDS       25683224//22608085 chr4:100918109-100918110(+) m6A CDS       25683224//22608085 chr4:100918136-100918137(+) m6A CDS       25683224//22608085 chr4:100949081-100949082(+) m6A CDS       25683224//22608085 chr4:100988147-100988148(+) m6A CDS       25683224//25412662 chr4:100988177-100988178(+) m6A CDS       25683224//25412662 chr4:100988217-100988218(+) m6A CDS       25683224//25412662 chr4:100988633-100988634(+) m6A CDS       25683224//25412662 chr4:100989380-100989381(+) m6A CDS       25683224//25412662 chr4:100990825-100990826(+) m6A CDS       25683224//25412662 chr4:100990843-100990844(+) m6A CDS       25683224//25412662 chr4:100990864-100990865(+) m6A CDS       25683224//25412662 chr4:100990878-100990879(+) m6A CDS       25683224//25412662 chr4:100990888-100990889(+) m6A CDS       25683224//25412662 chr4:100994100-100994101(+) m6A CDS       25683224//25412662 chr4:100994628-100994629(+) m6A exon//intron       25683224//25412662 chr4:100994820-100994821(+) m6A CDS//exon       25683224//25412662//25569111 chr4:101002888-101002889(+) m6A CDS//exon//intron       25683224//25456834//25412662//24981863//25569111 chr4:101002897-101002898(+) m6A CDS//exon//intron       25683224//25456834//25412662//24981863//25569111 chr4:101002945-101002946(+) m6A CDS//exon//intron       25683224//25456834//25412662//24981863//25569111//22608085 chr4:101002963-101002964(+) m6A CDS//exon//intron       25683224//25456834//25412662//24981863//25569111//22608085 chr4:101002969-101002970(+) m6A CDS//exon//intron       25683224//25456834//25412662//24981863//25569111//22608085 chr4:101002983-101002984(+) m6A CDS//exon//intron       25683224//25456834//25412662//24981863//25569111//22608085 chr4:101003280-101003281(+) m6A 3'UTR//intron       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr4:101003304-101003305(+) m6A 3'UTR//intron       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr4:101003328-101003329(+) m6A 3'UTR//intron       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr4:101003343-101003344(+) m6A 3'UTR//intron       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr4:101003456-101003457(+) m6A 3'UTR//intron       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr4:101003483-101003484(+) m6A 3'UTR//intron       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr4:101003575-101003576(+) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//22608085 chr4:101003583-101003584(+) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//22608085 chr4:101003604-101003605(+) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//22608085 chr4:101003716-101003717(+) m6A 3'UTR//intron       25683224//25456834//24981863//25412662//25569111//22608085 chr4:101003724-101003725(+) m6A 3'UTR//intron       25683224//25456834//24981863//25412662//25569111//22608085 chr4:101003732-101003733(+) m6A 3'UTR//intron       25683224//25456834//24981863//25412662//25569111//22608085 chr4:101003740-101003741(+) m6A 3'UTR//intron       25683224//25456834//24981863//25412662//25569111//22608085

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-3-3p
Interactor2: Cachd1

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar