Basic Information:

  VIRBase ID:  

VHID00634666

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-3-3p:  MIMAT0001566          Rab6b:  NM_173781     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-3-3p	Rab6b
miRBase Accession/Entrez ID	MIMAT0001566	270192
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	9630015C03//AI844641//C330006L04Rik//D9Bwg0185e

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Rab6b	chr9:103111972-103111973(+) m6A 5'UTR//exon       25683224//25412662//24981863 chr9:103112181-103112182(+) m6A CDS//exon       25683224//25412662//24981863//22608085 chr9:103160849-103160850(+) m6A CDS//exon       25683224//22608085 chr9:103160865-103160866(+) m6A CDS//exon       25683224//22608085 chr9:103161082-103161083(+) m6A CDS//exon       25683224//22608085 chr9:103161133-103161134(+) m6A CDS//exon       25683224//22608085 chr9:103162561-103162562(+) m6A CDS//exon       25683224//22608085 chr9:103163833-103163834(+) m6A CDS       25683224//25412662//24981863//22608085 chr9:103163848-103163849(+) m6A CDS       25683224//25412662//24981863//22608085 chr9:103163870-103163871(+) m6A CDS       25683224//25412662//24981863//22608085 chr9:103163882-103163883(+) m6A CDS       25683224//25412662//24981863//22608085 chr9:103181199-103181200(+) m6A CDS       25683224//25412662//24981863//22608085 chr9:103181317-103181318(+) m6A 3'UTR       25683224//24981863//22608085 chr9:103181332-103181333(+) m6A 3'UTR       25683224//24981863//22608085 chr9:103181383-103181384(+) m6A 3'UTR       25683224//24981863//22608085 chr9:103181411-103181412(+) m6A 3'UTR       25683224//24981863//22608085 chr9:103181441-103181442(+) m6A 3'UTR       25683224//22608085 chr9:103181496-103181497(+) m6A 3'UTR       25683224//22608085 chr9:103181777-103181778(+) m6A 3'UTR       25683224//24981863//25569111 chr9:103181786-103181787(+) m6A 3'UTR       25683224//24981863//25569111 chr9:103181826-103181827(+) m6A 3'UTR       25683224//24981863//25569111//26404942 chr9:103181872-103181873(+) m6A 3'UTR       25683224//24981863//25569111//26404942 chr9:103181912-103181913(+) m6A 3'UTR       25683224//24981863//25569111//26404942 chr9:103182031-103182032(+) m6A 3'UTR       25683224//24981863//25569111//26404942 chr9:103182169-103182170(+) m6A 3'UTR       25683224//25412662//24981863//25569111//26404942//22608085 chr9:103182243-103182244(+) m6A 3'UTR       25683224//25412662//24981863//25569111//26404942 chr9:103182260-103182261(+) m6A 3'UTR       25683224//24981863//25412662//25569111//26404942//22608085 chr9:103182491-103182492(+) m6A 3'UTR       25569111//22608085 chr9:103182498-103182499(+) m6A 3'UTR       25569111//22608085 chr9:103182567-103182568(+) m6A 3'UTR       25569111//22608085 chr9:103182656-103182657(+) m6A 3'UTR       25683224//25569111//26404942//22608085 chr9:103182695-103182696(+) m6A 3'UTR       25683224//25569111//26404942//22608085 chr9:103182814-103182815(+) m6A 3'UTR       25683224//24981863//25569111//26404942//22608085 chr9:103182856-103182857(+) m6A 3'UTR       25683224//24981863//25569111//26404942//22608085 chr9:103182888-103182889(+) m6A 3'UTR       25683224//24981863//25569111//26404942//22608085 chr9:103182963-103182964(+) m6A 3'UTR       25683224//24981863//26404942 chr9:103183460-103183461(+) m6A 3'UTR       25683224//26404942//22608085 chr9:103183537-103183538(+) m6A 3'UTR       25683224//22608085 chr9:103183559-103183560(+) m6A 3'UTR       25683224//22608085 chr9:103183635-103183636(+) m6A 3'UTR       25683224//24981863//22608085 chr9:103183654-103183655(+) m6A 3'UTR       25683224//24981863//22608085 chr9:103183795-103183796(+) m6A 3'UTR       24981863//22608085 chr9:103183933-103183934(+) m6A 3'UTR       25683224//22608085 chr9:103183995-103183996(+) m6A 3'UTR       25683224//22608085 chr9:103184046-103184047(+) m6A 3'UTR       25683224//22608085 chr9:103184070-103184071(+) m6A 3'UTR       25683224//22608085 chr9:103184199-103184200(+) m6A 3'UTR       25683224//22608085 chr9:103184266-103184267(+) m6A 3'UTR       25683224//22608085 chr9:103184522-103184523(+) m6A 3'UTR       25683224//22608085 chr9:103184580-103184581(+) m6A 3'UTR       25683224//22608085 chr9:103184606-103184607(+) m6A 3'UTR       25683224//22608085 chr9:103184612-103184613(+) m6A 3'UTR       25683224//22608085 chr9:103184648-103184649(+) m6A 3'UTR       25683224//22608085 chr9:103184694-103184695(+) m6A 3'UTR       25683224//22608085 chr9:103184699-103184700(+) m6A 3'UTR       25683224//22608085 chr9:103184969-103184970(+) m6A 3'UTR       25683224//24981863//26404942 chr9:103184976-103184977(+) m6A 3'UTR       25683224//24981863//26404942 chr9:103185228-103185229(+) m6A 3'UTR       25683224//24981863//22608085 chr9:103185246-103185247(+) m6A 3'UTR       24981863//22608085 chr9:103185253-103185254(+) m6A 3'UTR       24981863//22608085

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-3-3p
Interactor2: Rab6b

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar