Detail Information

Basic Information:


  VIRBase ID:  

VHID00634649

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-3-3p:           Nat8l:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol mghv-miR-M1-3-3p Nat8l
miRBase
Accession/Entrez ID
MIMAT0001566 269642
Organism Murid gammaherpesvirus 4 (MuHV-4) Mus musculus
Category miRNA mRNA
Alias - 1110038O08Rik//Sh//Shati

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Nat8l
chr5:33996102-33996103(+) m6A 5'UTR       25683224//25456834//25412662//24981863//22608085
chr5:33996179-33996180(+) m6A 5'UTR       25683224//25456834//25412662//24981863//22608085
chr5:33996199-33996200(+) m6A 5'UTR       25683224//25456834//25412662//24981863//22608085
chr5:33996223-33996224(+) m6A 5'UTR       25683224//25456834//24981863//22608085
chr5:33996244-33996245(+) m6A 5'UTR       25683224//25456834//24981863//22608085
chr5:33996444-33996445(+) m6A 5'UTR       25683224//25412662//24981863//22608085
chr5:33996602-33996603(+) m6A 5'UTR       25683224//24981863
chr5:33996612-33996613(+) m6A 5'UTR       25683224//24981863
chr5:33996898-33996899(+) m6A CDS       25412662//24981863//22608085
chr5:33998494-33998495(+) m6A CDS       25683224//22608085
chr5:33999790-33999791(+) m6A exon//intron       25683224//25412662//22608085
chr5:34000851-34000852(+) m6A CDS       25683224//25412662//24981863//22608085
chr5:34000884-34000885(+) m6A CDS       25683224//25456834//25412662//24981863//22608085
chr5:34001032-34001033(+) m6A CDS       25683224//25412662//24981863//22608085
chr5:34001428-34001429(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085
chr5:34001437-34001438(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085
chr5:34001478-34001479(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085
chr5:34001503-34001504(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085
chr5:34001539-34001540(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085
chr5:34001669-34001670(+) m6A 3'UTR       25683224//25456834//25412662//24981863//22608085
chr5:34001733-34001734(+) m6A 3'UTR       25683224//25456834//25412662//24981863//22608085
chr5:34002001-34002002(+) m6A 3'UTR       25683224//22608085
chr5:34002024-34002025(+) m6A 3'UTR       25683224//22608085
chr5:34002150-34002151(+) m6A 3'UTR       25683224//22608085
chr5:34002178-34002179(+) m6A 3'UTR       25683224//22608085
chr5:34002213-34002214(+) m6A 3'UTR       25683224//22608085
chr5:34002238-34002239(+) m6A 3'UTR       25683224//22608085
chr5:34002341-34002342(+) m6A 3'UTR       25683224//22608085
chr5:34002358-34002359(+) m6A 3'UTR       25683224//22608085
chr5:34002436-34002437(+) m6A 3'UTR       25683224//22608085
chr5:34002530-34002531(+) m6A 3'UTR       25683224//24981863//22608085
chr5:34002618-34002619(+) m6A 3'UTR       25683224//22608085
chr5:34002662-34002663(+) m6A 3'UTR       25683224//22608085
chr5:34002668-34002669(+) m6A 3'UTR       25683224//22608085
chr5:34002753-34002754(+) m6A 3'UTR       25683224//22608085
chr5:34002882-34002883(+) m6A 3'UTR       25683224//24981863
chr5:34002893-34002894(+) m6A 3'UTR       25683224//24981863
chr5:34002962-34002963(+) m6A 3'UTR       25683224//24981863
chr5:34003027-34003028(+) m6A 3'UTR       25683224//24981863
chr5:34003058-34003059(+) m6A 3'UTR       25683224//24981863
chr5:34003227-34003228(+) m6A 3'UTR       25683224//25412662//22608085
chr5:34003245-34003246(+) m6A 3'UTR       25683224//25412662//22608085
chr5:34003474-34003475(+) m6A 3'UTR       25683224//22608085
chr5:34003644-34003645(+) m6A 3'UTR       25683224//22608085
chr5:34004014-34004015(+) m6A 3'UTR       25683224//22608085
chr5:34004094-34004095(+) Y 3'UTR//exon       26075521
chr5:34004409-34004410(+) m6A 3'UTR       25683224//24981863//22608085
chr5:34004462-34004463(+) m6A 3'UTR       25683224//24981863//22608085
chr5:34004474-34004475(+) m6A 3'UTR       25683224//24981863//22608085
chr5:34004515-34004516(+) m6A 3'UTR       25683224//24981863
chr5:34004524-34004525(+) m6A 3'UTR       25683224//24981863
chr5:34004553-34004554(+) m6A 3'UTR       25683224//24981863
chr5:34004658-34004659(+) m6A 3'UTR       25683224//24981863//22608085
chr5:34004663-34004664(+) m6A 3'UTR       25683224//24981863//22608085
chr5:34004701-34004702(+) m6A 3'UTR       25683224//24981863//22608085
chr5:34004730-34004731(+) m6A 3'UTR       25683224//22608085
chr5:34004883-34004884(+) m6A 3'UTR       25683224//22608085
chr5:34004964-34004965(+) m6A 3'UTR       25683224//22608085
chr5:34005029-34005030(+) m6A 3'UTR       25683224//22608085
chr5:34005167-34005168(+) m6A 3'UTR       25683224//22608085
chr5:34005444-34005445(+) m6A 3'UTR       25683224//22608085
chr5:34005655-34005656(+) m6A 3'UTR       25683224//24981863//22608085
chr5:34005771-34005772(+) m6A 3'UTR       25683224//22608085

Interaction Network (The top 100 interactions):


Interactor1: mghv-miR-M1-3-3p
Interactor2: Nat8l

Evidence Support:


Prediction-Evidence cRep//Rep
Support Database RepTar

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