Basic Information:

  VIRBase ID:  

VHID00634518

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-3-3p:  MIMAT0001566          Plekha6:  NM_182930     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-3-3p	Plekha6
miRBase Accession/Entrez ID	MIMAT0001566	240753
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	9530028L01Rik//AU042621//Pe//Pepp3

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	Plekha6	chr1:135194834(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	Plekha6	chr1:133298257(+) A-I intron -    22524474

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Plekha6	chr1:133181425-133181426(+) m6A 5'UTR//intron       25412662//24981863//22608085 chr1:133181512-133181513(+) m6A 5'UTR//intron       25412662//24981863 chr1:133246121-133246122(+) m6A 5'UTR//intron       25412662 chr1:133256608-133256609(+) m6A exon//intron       22608085 chr1:133256674-133256675(+) m6A exon//intron       22608085 chr1:133260052-133260053(+) m6A 5'UTR//CDS//exon       25412662//22608085 chr1:133260066-133260067(+) m6A CDS//exon       25412662//22608085 chr1:133263805-133263806(+) m6A CDS//exon       25412662 chr1:133266637-133266638(+) m6A CDS//exon       25412662//22608085 chr1:133266720-133266721(+) m6A exon//intron       25412662 chr1:133272222-133272223(+) m6A CDS//exon       25412662//24981863//25569111//22608085 chr1:133272231-133272232(+) m6A CDS//exon       25412662//24981863//25569111//22608085 chr1:133272247-133272248(+) m6A CDS//exon       25412662//24981863//25569111//22608085 chr1:133272302-133272303(+) m6A CDS//exon       25683224//25412662//24981863//25456834//25569111//22608085 chr1:133272377-133272378(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr1:133272409-133272410(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr1:133272416-133272417(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr1:133272475-133272476(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr1:133272555-133272556(+) m6A CDS       25683224//25412662//24981863//25569111//22608085 chr1:133272565-133272566(+) m6A CDS       25683224//25412662//24981863//25569111//22608085 chr1:133272630-133272631(+) m6A CDS       25683224//25412662//24981863 chr1:133272651-133272652(+) m6A CDS       25412662//24981863 chr1:133272681-133272682(+) m6A CDS       24981863 chr1:133274052-133274053(+) m6A CDS       25412662 chr1:133274318-133274319(+) m6A CDS       25412662//25569111 chr1:133274808-133274809(+) m6A CDS//intron       25412662//25569111 chr1:133274830-133274831(+) m6A CDS//intron       25412662 chr1:133275816-133275817(+) m6A CDS//intron       25412662 chr1:133275842-133275843(+) m6A CDS//intron       25412662 chr1:133275857-133275858(+) m6A CDS//intron       25412662 chr1:133279387-133279388(+) m6A CDS//intron       25412662 chr1:133279406-133279407(+) m6A CDS//intron       25412662 chr1:133279421-133279422(+) m6A CDS//intron       25412662 chr1:133280399-133280400(+) m6A CDS//intron       25412662 chr1:133281810-133281811(+) m6A CDS       25412662 chr1:133281826-133281827(+) m6A CDS       25412662 chr1:133282143-133282144(+) m6A CDS       25412662 chr1:133282222-133282223(+) m6A CDS       25412662//22608085 chr1:133283301-133283302(+) m6A CDS       25412662//22608085 chr1:133283335-133283336(+) m6A CDS       25412662 chr1:133284952-133284953(+) m6A CDS       25683224//25412662 chr1:133285250-133285251(+) m6A CDS       25412662 chr1:133285256-133285257(+) m6A CDS       25412662 chr1:133286381-133286382(+) m6A CDS//intron       25412662//22608085 chr1:133287475-133287476(+) m6A CDS       25412662//22608085 chr1:133287487-133287488(+) m6A CDS       25412662//22608085 chr1:133287500-133287501(+) m6A CDS       25412662//22608085 chr1:133287511-133287512(+) m6A CDS       25412662//22608085 chr1:133287558-133287559(+) m6A CDS       25412662//22608085 chr1:133287793-133287794(+) m6A CDS       25412662//22608085 chr1:133287844-133287845(+) m6A CDS       25412662 chr1:133287855-133287856(+) m6A CDS       25412662 chr1:133291870-133291871(+) m6A exon//intron       25412662 chr1:133291899-133291900(+) m6A exon//intron       25412662 chr1:133292421-133292422(+) m6A CDS//exon       25412662//22608085 chr1:133292607-133292608(+) m6A exon//intron       25412662 chr1:133292623-133292624(+) m6A exon//intron       25412662 chr1:133294216-133294217(+) m6A exon//intron       25412662 chr1:133294594-133294595(+) m6A CDS       25412662 chr1:133294615-133294616(+) m6A CDS       25412662 chr1:133299830-133299831(+) m6A 3'UTR//exon       25412662//24981863 chr1:133299854-133299855(+) m6A 3'UTR//exon       25412662//24981863//22608085 chr1:133299876-133299877(+) m6A 3'UTR//exon       25412662//24981863//22608085 chr1:133299952-133299953(+) m6A 3'UTR//exon       25456834//25412662//24981863//25569111//22608085 chr1:133300113-133300114(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr1:133300118-133300119(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr1:133300137-133300138(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr1:133300801-133300802(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr1:133300950-133300951(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr1:133300955-133300956(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr1:133300965-133300966(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr1:133301021-133301022(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr1:133301048-133301049(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr1:133301063-133301064(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr1:133301092-133301093(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr1:133301104-133301105(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr1:133301122-133301123(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr1:133301171-133301172(+) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085//22575960 chr1:133301289-133301290(+) m6A 3'UTR//exon       25456834//24981863//25569111//22608085//22575960 chr1:133301410-133301411(+) m6A 3'UTR//exon       25456834//24981863//22608085 chr1:133301470-133301471(+) m6A 3'UTR//exon       24981863 chr1:133302613-133302614(+) m6A 3'UTR       25412662

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-3-3p
Interactor2: Plekha6

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar