Basic Information:

  VIRBase ID:  

VHID00634348

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-3-3p:  MIMAT0001566          Ythdf3:  NM_001145919     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-3-3p	Ythdf3
miRBase Accession/Entrez ID	MIMAT0001566	229096
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	9130022A11Rik

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	Ythdf3	chr3:16095872(+) A-I      intronic chr3:16095857(+) A-I      intronic chr3:16114946(+) A-I      3'UTR chr3:16095865(+) A-I      intronic chr3:16095836(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	Ythdf3	chr3:16214946(+) C-I intron -    22448268 chr3:16195836(+) A-I intron -    22524474 chr3:16195857(+) A-I intron -    22524474 chr3:16195865(+) A-I intron -    22524474 chr3:16195872(+) A-I intron -    22524474

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Ythdf3	chr3:16183923-16183924(+) m6A 5'UTR//CDS//exon       25569111//22608085 chr3:16186974-16186975(+) m6A 5'UTR//exon//intron       25569111//22608085 chr3:16189554-16189555(+) m6A CDS//exon       24981863//22608085 chr3:16203203-16203204(+) m6A CDS//intron       24981863//25569111 chr3:16203962-16203963(+) m6A CDS       25456834//25412662//24981863//25569111//22608085 chr3:16203980-16203981(+) m6A CDS       25456834//25412662//24981863//25569111//22608085 chr3:16204101-16204102(+) m6A CDS       25683224//25456834//24981863//25569111//22608085//22575960 chr3:16204118-16204119(+) m6A CDS       25683224//25456834//24981863//25569111//22608085//22575960 chr3:16204196-16204197(+) m6A CDS       25683224//25456834//24981863//25569111//22608085//22575960 chr3:16204268-16204269(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr3:16204308-16204309(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr3:16204391-16204392(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//26404942//22608085//22575960 chr3:16204430-16204431(+) m6A CDS       25683224//25456834//24981863//25569111//26404942//22608085//22575960 chr3:16204442-16204443(+) m6A CDS       25683224//25456834//24981863//25569111//26404942//22608085 chr3:16204448-16204449(+) m6A CDS       25683224//25456834//24981863//25569111//26404942//22608085 chr3:16204502-16204503(+) m6A CDS       25683224//25456834//24981863//25569111//26404942//22608085//22575960 chr3:16204521-16204522(+) m6A CDS       25683224//25456834//24981863//25569111//26404942//22608085//22575960 chr3:16204584-16204585(+) m6A CDS       25683224//25456834//24981863//25569111//26404942//22608085//22575960 chr3:16204688-16204689(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//26404942//22608085//22575960 chr3:16204773-16204774(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr3:16204789-16204790(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr3:16204797-16204798(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//26404942//22608085//22575960 chr3:16204810-16204811(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//26404942//22608085//22575960 chr3:16204880-16204881(+) m6A CDS       25683224//25456834//24981863//25569111//26404942//22608085 chr3:16204894-16204895(+) m6A CDS       25683224//25456834//24981863//25569111//26404942//22608085//22575960 chr3:16204912-16204913(+) m6A CDS       25683224//25456834//24981863//25569111//26404942//22608085//22575960 chr3:16204924-16204925(+) m6A CDS       25683224//25456834//24981863//25569111//26404942//22608085//22575960 chr3:16205102-16205103(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr3:16205140-16205141(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr3:16205270-16205271(+) m6A CDS       25683224//25456834//24981863//25569111//26404942//22608085 chr3:16205290-16205291(+) m6A CDS       25683224//25456834//24981863//25569111//26404942//22608085 chr3:16213967-16213968(+) m6A CDS       25683224//25456834//24981863//25569111//26404942//22608085 chr3:16214025-16214026(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085//22575960 chr3:16214100-16214101(+) m6A 3'UTR       25456834//24981863//25569111//26404942//22608085//22575960 chr3:16214171-16214172(+) m6A 3'UTR       25456834//24981863//25569111//26404942//22608085//22575960 chr3:16214183-16214184(+) m6A 3'UTR       25456834//24981863//25569111//26404942//22608085//22575960 chr3:16214273-16214274(+) m6A 3'UTR       25456834//24981863//25569111//26404942//22608085 chr3:16214544-16214545(+) m6A 3'UTR       25569111 chr3:16214574-16214575(+) m6A 3'UTR       25569111//22608085 chr3:16214593-16214594(+) m6A 3'UTR       25569111//22608085 chr3:16216283-16216284(+) m6A 3'UTR       24981863//22608085 chr3:16216297-16216298(+) m6A 3'UTR       24981863//22608085 chr3:16216443-16216444(+) Y 3'UTR//exon       26075521 chr3:16216968-16216969(+) Y 3'UTR//exon       26075521

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-3-3p
Interactor2: Ythdf3

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar