Basic Information:

  VIRBase ID:  

VHID00634258

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-3-3p:  MIMAT0001566          Scara3:  NM_172604     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-3-3p	Scara3
miRBase Accession/Entrez ID	MIMAT0001566	219151
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	APC7//C130058N24Rik//CSR//CSR1//MSLR1//MSRL1

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Scara3	chr14:65919560-65919561(-) m6A 3'UTR       25683224//24981863//25569111//22608085 chr14:65919611-65919612(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr14:65919617-65919618(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr14:65919713-65919714(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr14:65919743-65919744(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr14:65919777-65919778(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr14:65919789-65919790(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr14:65919851-65919852(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr14:65919974-65919975(-) m6A 3'UTR       25683224//25412662//24981863//25569111 chr14:65919989-65919990(-) m6A 3'UTR       25683224//25412662//24981863//25569111 chr14:65920012-65920013(-) m6A 3'UTR       25683224//25412662//24981863//25569111 chr14:65920063-65920064(-) m6A 3'UTR       25683224//25412662//24981863//25569111 chr14:65920094-65920095(-) m6A 3'UTR       25683224//25412662//24981863//25569111 chr14:65920752-65920753(-) m6A CDS       25683224//25412662//22608085 chr14:65920772-65920773(-) m6A CDS       25683224//25412662//22608085 chr14:65920781-65920782(-) m6A CDS       25683224//25412662//22608085 chr14:65920805-65920806(-) m6A CDS       25683224//25412662//24981863//25569111//22608085 chr14:65920849-65920850(-) m6A CDS       25683224//25412662//24981863//25569111 chr14:65920889-65920890(-) m6A CDS       25683224//25412662//24981863//25569111 chr14:65920961-65920962(-) m6A CDS       25683224//25412662//24981863//25569111 chr14:65921042-65921043(-) m6A CDS       25683224//25412662//24981863//25569111//22608085 chr14:65921078-65921079(-) m6A CDS       25683224//25412662//24981863//25569111//22608085 chr14:65921087-65921088(-) m6A CDS       25683224//25412662//24981863//25569111//22608085 chr14:65921114-65921115(-) m6A CDS       25683224//25412662//24981863//25569111//22608085 chr14:65921132-65921133(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr14:65921159-65921160(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr14:65921168-65921169(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr14:65930841-65930842(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr14:65930877-65930878(-) m6A CDS       25683224//25412662//24981863//25569111//22608085 chr14:65930892-65930893(-) m6A CDS       25683224//25412662//24981863//25569111//22608085 chr14:65931195-65931196(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr14:65931231-65931232(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr14:65931325-65931326(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr14:65931334-65931335(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr14:65931352-65931353(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr14:65931367-65931368(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr14:65931386-65931387(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr14:65931396-65931397(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr14:65931433-65931434(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr14:65931445-65931446(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr14:65931478-65931479(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr14:65931543-65931544(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr14:65931558-65931559(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr14:65931608-65931609(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr14:65931700-65931701(-) m6A CDS       25683224//25412662//24981863//25569111 chr14:65931709-65931710(-) m6A CDS       25683224//25412662//24981863//25569111 chr14:65931714-65931715(-) m6A CDS       25683224//25412662//24981863//25569111 chr14:65933107-65933108(-) m6A CDS       25683224//25412662//25569111 chr14:65936445-65936446(-) m6A CDS       25683224//25412662 chr14:65936471-65936472(-) m6A CDS       25683224//25412662 chr14:65938239-65938240(-) m6A CDS       25683224//25412662 chr14:65938260-65938261(-) m6A CDS       25683224//25412662 chr14:65953504-65953505(-) m6A 5'UTR       25683224//25412662 chr14:65953575-65953576(-) m6A 5'UTR       25412662//25569111 chr14:65953619-65953620(-) m6A 5'UTR       25412662//25569111

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-3-3p
Interactor2: Scara3

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar