Detail Information

Basic Information:


  VIRBase ID:  

VHID00634190

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-3-3p:           Sbno2:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol mghv-miR-M1-3-3p Sbno2
miRBase
Accession/Entrez ID
MIMAT0001566 216161
Organism Murid gammaherpesvirus 4 (MuHV-4) Mus musculus
Category miRNA mRNA
Alias - BC019206//F730040C21//S//Sno//Stno

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Sbno2
chr10:80057422-80057423(-) m6A CDS       25683224//25456834//25412662//24981863//25569111
chr10:80057501-80057502(-) m6A CDS       25683224//25456834//25412662//24981863//25569111
chr10:80057511-80057512(-) m6A CDS       25683224//25456834//25412662//24981863//25569111
chr10:80057536-80057537(-) m6A CDS       25683224//25456834//25412662//24981863//25569111
chr10:80057605-80057606(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22575960
chr10:80057635-80057636(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22575960
chr10:80057710-80057711(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22575960
chr10:80057820-80057821(-) m6A CDS       25683224//25412662//24981863//25569111
chr10:80057972-80057973(-) m6A CDS       25683224//25412662//25569111
chr10:80057979-80057980(-) m6A CDS       25683224//25412662//25569111
chr10:80058130-80058131(-) m6A CDS       25683224//25412662
chr10:80058143-80058144(-) m6A CDS       25683224//25412662
chr10:80058305-80058306(-) m6A CDS       25412662
chr10:80058440-80058441(-) m6A CDS       25412662
chr10:80061003-80061004(-) m6A CDS       25412662
chr10:80061051-80061052(-) m6A CDS       25412662
chr10:80061352-80061353(-) m6A CDS       25412662
chr10:80061378-80061379(-) m6A CDS       25412662
chr10:80061404-80061405(-) m6A CDS       25412662
chr10:80062204-80062205(-) m6A CDS       25683224//25412662
chr10:80062263-80062264(-) m6A CDS       25683224//25412662
chr10:80062306-80062307(-) m6A CDS       25683224//25412662
chr10:80064165-80064166(-) m6A CDS       25683224//25412662
chr10:80064202-80064203(-) m6A CDS       25683224//25412662
chr10:80064323-80064324(-) m6A CDS       25683224//25412662
chr10:80067313-80067314(-) m6A CDS       25683224
chr10:80067326-80067327(-) m6A CDS       25683224
chr10:80072498-80072499(-) m6A CDS       25569111
chr10:80082676-80082677(-) m6A CDS       24981863//25569111
chr10:80084243-80084244(-) m6A CDS       24981863
chr10:80086305-80086306(-) m6A CDS       24981863
chr10:80086322-80086323(-) m6A CDS       24981863
chr10:80102643-80102644(-) m6A 5'UTR       25683224//24981863//25569111
chr10:80102682-80102683(-) m6A 5'UTR       24981863//25569111

Interaction Network (The top 100 interactions):


Interactor1: mghv-miR-M1-3-3p
Interactor2: Sbno2

Evidence Support:


Prediction-Evidence cRep
Support Database RepTar

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