Detail Information

Basic Information:


  VIRBase ID:  

VHID00634163

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-3-3p:           Tet2:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol mghv-miR-M1-3-3p Tet2
miRBase
Accession/Entrez ID
MIMAT0001566 214133
Organism Murid gammaherpesvirus 4 (MuHV-4) Mus musculus
Category miRNA mRNA
Alias - Ayu17-44//Ayu17-449//E130014J05Rik//mKIAA1546

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Tet2
chr3:133464517-133464518(-) m6A 3'UTR//exon       25683224//24981863//25456834//25569111
chr3:133464553-133464554(-) m6A 3'UTR//exon       25683224//24981863//25456834//25569111//22608085
chr3:133464564-133464565(-) m6A 3'UTR//exon       25683224//24981863//25456834//25569111//22608085
chr3:133464574-133464575(-) m6A 3'UTR//exon       25683224//24981863//25456834//25569111//22608085
chr3:133464610-133464611(-) m6A 3'UTR//exon       25683224//24981863//25569111
chr3:133466210-133466211(-) m6A 3'UTR//exon       25456834//24981863//25569111
chr3:133466296-133466297(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085
chr3:133466302-133466303(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085
chr3:133466373-133466374(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085
chr3:133466470-133466471(-) m6A 3'UTR//exon       25456834//24981863//25569111//22608085
chr3:133466485-133466486(-) m6A 3'UTR//exon       25456834//24981863//25569111//22608085
chr3:133466664-133466665(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085
chr3:133466717-133466718(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085//22575960
chr3:133466824-133466825(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr3:133466862-133466863(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr3:133466895-133466896(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr3:133466923-133466924(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr3:133467000-133467001(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085
chr3:133467282-133467283(-) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085//22575960
chr3:133467299-133467300(-) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085//22575960
chr3:133467449-133467450(-) m6A CDS//exon       25456834//24981863//25569111//22608085
chr3:133467564-133467565(-) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085
chr3:133467610-133467611(-) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085//22575960
chr3:133467640-133467641(-) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085//22575960
chr3:133467682-133467683(-) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085//22575960
chr3:133467700-133467701(-) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085//22575960
chr3:133467706-133467707(-) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085//22575960
chr3:133467775-133467776(-) m6A CDS//exon       25456834//24981863//25569111//22608085
chr3:133467847-133467848(-) m6A CDS//exon//intron       25456834//24981863//25569111//22608085
chr3:133467907-133467908(-) m6A CDS//exon//intron       25456834//24981863//25569111//22608085
chr3:133467981-133467982(-) m6A CDS//exon//intron       25456834//24981863//25569111//22608085
chr3:133469285-133469286(-) m6A CDS//exon//intron       24981863//25569111
chr3:133469344-133469345(-) m6A CDS//exon//intron       25683224//24981863//25569111
chr3:133469358-133469359(-) m6A CDS//exon//intron       25683224//25412662//24981863//25569111
chr3:133469395-133469396(-) m6A CDS//exon//intron       25683224//25412662//24981863//25569111
chr3:133469509-133469510(-) m1A CDS//exon//intron       26863196
chr3:133480311-133480312(-) m6A CDS//exon       25683224
chr3:133483254-133483255(-) m6A CDS       -
chr3:133485548-133485549(-) m6A CDS       24981863//25569111
chr3:133485636-133485637(-) m6A CDS       25683224//25456834//24981863//25569111
chr3:133485680-133485681(-) m6A CDS       25683224//25456834//24981863//25569111
chr3:133485749-133485750(-) m6A CDS       25683224//25456834//24981863//25569111
chr3:133485757-133485758(-) m6A CDS       25683224//25456834//24981863//25569111
chr3:133485872-133485873(-) m6A CDS       25683224//25456834//24981863//25569111//22608085
chr3:133485889-133485890(-) m6A CDS       25683224//25456834//24981863//25569111//22608085
chr3:133485937-133485938(-) m6A CDS       25683224//25456834//24981863//25569111//22608085
chr3:133485947-133485948(-) m6A CDS       25683224//25456834//24981863//25569111//22608085
chr3:133485996-133485997(-) m6A CDS       25683224//25456834//24981863//25569111//22608085
chr3:133486012-133486013(-) m6A CDS       25683224//25456834//24981863//25569111//22608085
chr3:133486018-133486019(-) m6A CDS       25683224//25456834//24981863//25569111//22608085
chr3:133486128-133486129(-) m6A CDS       25683224//25456834//24981863//25569111//22608085
chr3:133486175-133486176(-) m6A CDS       25683224//24981863//25569111//22608085
chr3:133486236-133486237(-) m6A CDS       25683224//24981863//25569111//22608085
chr3:133486245-133486246(-) m6A CDS       25683224//24981863//25569111//22608085
chr3:133486252-133486253(-) m6A CDS       25683224//24981863//25569111
chr3:133486280-133486281(-) m6A CDS       25683224//24981863//25569111
chr3:133486420-133486421(-) m6A CDS       25683224//24981863//25569111
chr3:133486540-133486541(-) m6A CDS       25683224//24981863//25456834//25569111
chr3:133486617-133486618(-) m6A CDS       25683224//24981863//25456834//25569111
chr3:133486633-133486634(-) m6A CDS       25683224//24981863//25456834//25569111
chr3:133486687-133486688(-) m6A CDS       25683224//24981863//25569111
chr3:133486798-133486799(-) m6A CDS       25683224//24981863//25569111
chr3:133486848-133486849(-) m6A CDS       24981863//25569111
chr3:133486868-133486869(-) m6A CDS       24981863//25569111
chr3:133486875-133486876(-) m6A CDS       24981863//25569111
chr3:133486921-133486922(-) m6A CDS       24981863//25569111
chr3:133486982-133486983(-) m6A CDS       24981863//25456834//25569111
chr3:133487011-133487012(-) m6A CDS       25683224//24981863//25456834//25569111
chr3:133487056-133487057(-) m6A CDS       25683224//24981863//25456834//25569111
chr3:133487093-133487094(-) m6A CDS       25683224//24981863//25456834//25569111
chr3:133487135-133487136(-) m6A CDS       25683224//24981863//25456834//25569111
chr3:133487195-133487196(-) m6A CDS       25683224//24981863//25569111
chr3:133487303-133487304(-) m6A CDS       25683224//24981863//25456834//25569111
chr3:133487368-133487369(-) m6A CDS       25683224//24981863//25456834//25569111
chr3:133487382-133487383(-) m6A CDS       25683224//24981863//25456834//25569111
chr3:133487407-133487408(-) m6A CDS       25683224//24981863//25456834//25569111
chr3:133487438-133487439(-) m6A CDS       25683224//24981863//25456834//25569111
chr3:133487596-133487597(-) m6A CDS       24981863
chr3:133487618-133487619(-) m6A CDS       24981863
chr3:133487704-133487705(-) m6A CDS       25569111
chr3:133487709-133487710(-) m6A CDS       25569111
chr3:133487733-133487734(-) m6A CDS       25569111
chr3:133487756-133487757(-) m6A CDS       25569111
chr3:133487798-133487799(-) m6A CDS       25569111
chr3:133487872-133487873(-) m6A CDS       25569111
chr3:133487958-133487959(-) m6A CDS       25569111
chr3:133488016-133488017(-) m6A CDS       24981863//25569111
chr3:133488029-133488030(-) m6A CDS       24981863//25569111
chr3:133488042-133488043(-) m6A CDS       24981863//25569111
chr3:133488096-133488097(-) m6A CDS       24981863//25569111
chr3:133488171-133488172(-) m6A CDS       25683224//25412662//24981863//25569111
chr3:133488245-133488246(-) m6A CDS       25683224//24981863//25569111
chr3:133488282-133488283(-) m6A CDS       25683224//24981863//25569111
chr3:133488333-133488334(-) m6A CDS       25683224//24981863//25569111
chr3:133488338-133488339(-) m6A CDS       25683224//24981863//25569111
chr3:133488351-133488352(-) m6A CDS       24981863//25569111
chr3:133488377-133488378(-) m6A CDS       24981863//25569111
chr3:133488432-133488433(-) m6A CDS       24981863//25569111
chr3:133488516-133488517(-) m6A CDS       25683224//24981863//25569111
chr3:133488539-133488540(-) m6A CDS       25683224//24981863//25569111
chr3:133488569-133488570(-) m6A CDS       25683224//24981863//25569111
chr3:133488584-133488585(-) m6A CDS       25683224//24981863//25569111
chr3:133488632-133488633(-) m6A CDS       25683224//25412662//24981863//25569111
chr3:133488655-133488656(-) m6A CDS       25683224//25412662//24981863//25569111
chr3:133488660-133488661(-) m6A CDS       25683224//25412662//24981863//25569111
chr3:133488665-133488666(-) m6A CDS       25683224//25412662//24981863//25569111
chr3:133513467-133513468(-) m6A exon//intron       25683224//25412662//24981863//25569111
chr3:133513501-133513502(-) m6A exon//intron       25683224//25412662//25569111
chr3:133513536-133513537(-) m6A exon//intron       25412662//25569111
chr3:133514065-133514066(-) m6A 5'UTR//exon       25569111
chr3:133514139-133514140(-) m6A 5'UTR//exon       25683224//24981863//25569111
chr3:133538777-133538778(-) m6A exon//intron       25683224//24981863//25569111
chr3:133538843-133538844(-) m6A exon//intron       25683224//25569111
chr3:133538858-133538859(-) m6A exon//intron       25683224//25569111
chr3:133538887-133538888(-) m6A exon//intron       25683224
chr3:133538898-133538899(-) m6A exon//intron       25683224
chr3:133539085-133539086(-) m6A exon//intron       22608085
chr3:133539090-133539091(-) m6A exon//intron       22608085
chr3:133539117-133539118(-) m6A exon//intron       24981863//25569111//22608085
chr3:133544203-133544204(-) m6A 5'UTR//exon//intron       25683224//24981863//25569111//22608085
chr3:133544209-133544210(-) m6A 5'UTR//exon//intron       25683224//24981863//25569111//22608085
chr3:133544225-133544226(-) m6A 5'UTR//exon//intron       25683224//24981863//25569111//22608085
chr3:133544246-133544247(-) m6A 5'UTR//exon//intron       25683224//24981863//25569111//22608085
chr3:133544341-133544342(-) m6A 5'UTR//intron       25683224//24981863
chr3:133544352-133544353(-) m6A 5'UTR//intron       25683224//24981863

Interaction Network (The top 100 interactions):


Interactor1: mghv-miR-M1-3-3p
Interactor2: Tet2

Evidence Support:


Prediction-Evidence cRep//Rep
Support Database RepTar

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