Basic Information:

  VIRBase ID:  

VHID00634043

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-3-3p:  MIMAT0001566          Ash1l:  NM_138679     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-3-3p	Ash1l
miRBase Accession/Entrez ID	MIMAT0001566	192195
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	8030453L17Rik//Ash1//E430018P19Rik//Kmt2h

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	Ash1l	chr3:88835871(+) A-I      intronic chr3:88829222(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	Ash1l	chr3:89031949(+) A-I intron -    22524474

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Ash1l	chr3:88950789-88950790(+) m6A 5'UTR       25683224//25412662//24981863//25569111 chr3:88965842-88965843(+) m6A 5'UTR       24981863//25412662//25569111 chr3:88965860-88965861(+) m6A 5'UTR       25683224//24981863//25412662//25569111//22608085 chr3:88965915-88965916(+) m6A CDS       25683224//24981863//25412662//25569111//22608085 chr3:88966139-88966140(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr3:88966158-88966159(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr3:88966193-88966194(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr3:88966212-88966213(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr3:88966221-88966222(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr3:88966247-88966248(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr3:88981425-88981426(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr3:88981448-88981449(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr3:88981516-88981517(+) m6A CDS       25683224//25456834//24981863//25412662//25569111//22608085 chr3:88981532-88981533(+) m6A CDS       25683224//25456834//24981863//25412662//25569111//22608085 chr3:88981563-88981564(+) m6A CDS       25683224//25456834//24981863//25412662//25569111//22608085 chr3:88981576-88981577(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr3:88981614-88981615(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr3:88981716-88981717(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr3:88981736-88981737(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr3:88981767-88981768(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr3:88981804-88981805(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr3:88981888-88981889(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr3:88981906-88981907(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr3:88981933-88981934(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr3:88982016-88982017(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr3:88982053-88982054(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr3:88982079-88982080(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr3:88982113-88982114(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr3:88982139-88982140(+) m6A CDS       25683224//24981863//25569111//22608085 chr3:88982164-88982165(+) m6A CDS       25683224//24981863//25569111//22608085 chr3:88982184-88982185(+) m6A CDS       24981863//25569111//22608085 chr3:88982306-88982307(+) m6A CDS       24981863//25569111//22608085 chr3:88982322-88982323(+) m6A CDS       24981863//25569111//22608085 chr3:88982357-88982358(+) m6A CDS       24981863//25569111//22608085 chr3:88982365-88982366(+) m6A CDS       24981863//25569111//22608085 chr3:88982553-88982554(+) m6A CDS       24981863 chr3:88982581-88982582(+) m6A CDS       24981863//22608085 chr3:88982707-88982708(+) m6A CDS       24981863//22608085 chr3:88982848-88982849(+) m6A CDS       24981863//25569111//22608085 chr3:88982883-88982884(+) m6A CDS       25412662//24981863//25569111 chr3:88982932-88982933(+) m6A CDS       25412662//24981863//25569111 chr3:88982959-88982960(+) m6A CDS       25412662//24981863//25569111 chr3:88982969-88982970(+) m6A CDS       25412662//24981863//25569111 chr3:88983010-88983011(+) m6A CDS       25412662//24981863//25569111 chr3:88983015-88983016(+) m6A CDS       25412662//24981863//25569111 chr3:88983095-88983096(+) m6A CDS       24981863//25412662//25569111 chr3:88983202-88983203(+) m6A CDS       25569111 chr3:88983232-88983233(+) m6A CDS       25456834//25569111 chr3:88983298-88983299(+) m6A CDS       25456834//24981863 chr3:88983344-88983345(+) m6A CDS       25456834//24981863 chr3:88983520-88983521(+) m6A CDS       24981863//25569111 chr3:88983591-88983592(+) m6A CDS       24981863//25569111//22608085 chr3:88983627-88983628(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr3:88983639-88983640(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr3:88983703-88983704(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr3:88983729-88983730(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr3:88983736-88983737(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr3:88983749-88983750(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr3:88983779-88983780(+) m6A CDS       25683224//24981863//25456834//25569111//22608085 chr3:88983796-88983797(+) m6A CDS       25683224//24981863//25456834//25569111//22608085 chr3:88983938-88983939(+) m6A CDS       24981863//25569111//22608085 chr3:88983970-88983971(+) m6A CDS       24981863//25569111//22608085 chr3:88983977-88983978(+) m6A CDS       24981863//25569111//22608085 chr3:88984030-88984031(+) m6A CDS       24981863//25569111 chr3:88984066-88984067(+) m6A CDS       25683224//24981863//25569111 chr3:88984148-88984149(+) m6A CDS       25683224//24981863//25569111 chr3:88984195-88984196(+) m6A CDS       25683224//24981863//25569111 chr3:88984231-88984232(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr3:88984250-88984251(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr3:88984336-88984337(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr3:88984394-88984395(+) m6A CDS       25456834//24981863//25569111//22608085 chr3:88984421-88984422(+) m6A CDS       25456834//24981863//25569111//22608085 chr3:88984443-88984444(+) m6A CDS       25456834//24981863//25569111//22608085 chr3:88984465-88984466(+) m6A CDS       25456834//24981863//25569111//22608085 chr3:88984480-88984481(+) m6A CDS       25456834//24981863//25569111//22608085 chr3:88984517-88984518(+) m6A CDS       25456834//24981863//25569111//22608085 chr3:88984533-88984534(+) m6A CDS       25456834//24981863//25569111//22608085 chr3:88984549-88984550(+) m6A CDS       25456834//24981863//25569111//22608085 chr3:88984555-88984556(+) m6A CDS       25456834//24981863//25569111//22608085 chr3:88984609-88984610(+) m6A CDS       24981863//25569111//22608085 chr3:88984665-88984666(+) m6A CDS       24981863//25569111 chr3:88984678-88984679(+) m6A CDS       24981863//25569111 chr3:88984749-88984750(+) m6A CDS       24981863//25569111 chr3:88984815-88984816(+) m6A CDS       24981863//25569111 chr3:88984837-88984838(+) m6A CDS       24981863//25569111 chr3:88985152-88985153(+) m6A CDS       24981863//25569111 chr3:88985180-88985181(+) m6A CDS       24981863//25569111 chr3:88985254-88985255(+) m6A CDS       25683224//24981863//25569111 chr3:88985260-88985261(+) m6A CDS       25683224//24981863//25569111 chr3:88985272-88985273(+) m6A CDS       25683224//24981863//25569111 chr3:88985293-88985294(+) m6A CDS       25683224//25456834//24981863//25569111 chr3:88985448-88985449(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr3:88985457-88985458(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr3:88985467-88985468(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr3:88985522-88985523(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr3:88985611-88985612(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr3:88985619-88985620(+) m6A CDS       25683224//25456834//24981863//25569111//22608085//22575960 chr3:88985658-88985659(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr3:88985749-88985750(+) m6A CDS       25456834//24981863//25569111//22608085 chr3:89001794-89001795(+) m6A CDS       24981863//25569111//22608085 chr3:89007198-89007199(+) m6A CDS       25569111 chr3:89007342-89007343(+) m6A CDS       25456834//24981863//25569111//22608085 chr3:89007516-89007517(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr3:89007522-89007523(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr3:89007553-89007554(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr3:89007572-89007573(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr3:89007579-89007580(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr3:89007598-89007599(+) m6A CDS       25683224//25456834//24981863//25412662//25569111//22608085 chr3:89007696-89007697(+) m6A CDS       25683224//25456834//24981863//25412662//25569111//22608085 chr3:89007720-89007721(+) m6A CDS       25683224//25456834//24981863//25412662//25569111//22608085 chr3:89007762-89007763(+) m6A CDS       25683224//25456834//24981863//25412662//25569111//22608085 chr3:89007775-89007776(+) m6A CDS       25683224//24981863//25412662//25569111//22608085 chr3:89007817-89007818(+) m6A CDS       25683224//24981863//25569111 chr3:89007839-89007840(+) m6A CDS       25683224//24981863//25569111 chr3:89007867-89007868(+) m6A CDS       25683224//24981863//25569111 chr3:89023040-89023041(+) m6A CDS       25683224//24981863//25569111 chr3:89023081-89023082(+) m6A CDS       25683224//24981863//25569111 chr3:89023090-89023091(+) m6A CDS       25683224//24981863//25569111 chr3:89023202-89023203(+) m6A CDS//exon       25683224//24981863 chr3:89052046-89052047(+) m6A CDS       24981863//22608085 chr3:89052093-89052094(+) m6A CDS       24981863//22608085 chr3:89052810-89052811(+) m6A CDS//exon       25412662//24981863//22608085 chr3:89052911-89052912(+) m6A exon//intron       25412662//24981863 chr3:89052917-89052918(+) m6A exon//intron       25412662//24981863 chr3:89052958-89052959(+) m6A exon//intron       25412662//24981863 chr3:89052966-89052967(+) m6A exon//intron       25412662//24981863 chr3:89052982-89052983(+) m6A exon//intron       25412662//24981863 chr3:89053107-89053108(+) m6A CDS//exon       24981863 chr3:89066309-89066310(+) m6A CDS       25683224//22608085 chr3:89072557-89072558(+) m6A CDS       25683224//22608085 chr3:89072604-89072605(+) m6A CDS       25683224//24981863 chr3:89074740-89074741(+) m6A CDS       25683224//24981863//25569111 chr3:89076016-89076017(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr3:89076023-89076024(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr3:89076112-89076113(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr3:89076133-89076134(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr3:89076155-89076156(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr3:89077033-89077034(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr3:89077099-89077100(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr3:89077158-89077159(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr3:89077164-89077165(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr3:89077323-89077324(+) m6A 3'UTR       25683224//24981863//25412662 chr3:89077331-89077332(+) m6A 3'UTR       25683224//24981863//25412662 chr3:89077394-89077395(+) m6A 3'UTR       25683224 chr3:89078666-89078667(+) m6A 3'UTR       25683224 chr3:89078768-89078769(+) m6A 3'UTR       25683224

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Ash1l	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-3-3p
Interactor2: Ash1l

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar