Basic Information:

  VIRBase ID:  

VHID00633924

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-3-3p:  MIMAT0001566          Tm9sf3:  NM_133352     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-3-3p	Tm9sf3
miRBase Accession/Entrez ID	MIMAT0001566	107358
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	1810073M23Rik//2810031D16Rik//AI115521//AI413748//AW146116//AW549777//mKIAA4036//Sm//Smbp

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Tm9sf3	chr19:41211963-41211964(-) Y 3'UTR//exon       26075521 chr19:41212072-41212073(-) m6A 3'UTR       25683224//24981863//22608085 chr19:41212140-41212141(-) m6A 3'UTR       25683224//22608085 chr19:41214060-41214061(-) m6A 3'UTR       24981863//22608085 chr19:41214072-41214073(-) m6A 3'UTR       24981863//22608085 chr19:41214149-41214150(-) m6A 3'UTR       24981863//22608085 chr19:41214154-41214155(-) m6A 3'UTR       24981863//22608085 chr19:41214717-41214718(-) m6A 3'UTR       24981863//22608085 chr19:41214813-41214814(-) m6A 3'UTR       24981863//25569111 chr19:41215018-41215019(-) m6A 3'UTR       25412662//24981863//25569111//26404942//22608085 chr19:41215051-41215052(-) m6A 3'UTR       25412662//24981863//25569111//26404942//22608085 chr19:41215061-41215062(-) m6A 3'UTR       25412662//24981863//25569111//26404942//22608085 chr19:41215118-41215119(-) m6A CDS       25412662//24981863//25569111//26404942 chr19:41217157-41217158(-) m6A CDS       25569111//22608085 chr19:41217351-41217352(-) m6A CDS       25569111//22608085 chr19:41238787-41238788(-) m6A CDS       24981863//22608085 chr19:41238836-41238837(-) m6A CDS       24981863//22608085 chr19:41240629-41240630(-) m6A CDS       24981863//22608085 chr19:41246744-41246745(-) m6A CDS       25412662//22608085 chr19:41246755-41246756(-) m6A CDS       25412662//22608085 chr19:41256158-41256159(-) m6A CDS       25412662//24981863//22608085 chr19:41256207-41256208(-) m6A CDS       24981863//22608085 chr19:41256273-41256274(-) m6A CDS       25569111//22608085 chr19:41256323-41256324(-) m1A CDS       26863196 chr19:41263764-41263765(-) m6A CDS       25569111//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Tm9sf3	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-3-3p
Interactor2: Tm9sf3

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar