Detail Information

Basic Information:


  VIRBase ID:  

VHID00633869

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-3-3p:           Mapkapk3:      

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Interactor Information:


Interactor1 Interactor2
Symbol mghv-miR-M1-3-3p Mapkapk3
miRBase
Accession/Entrez ID
MIMAT0001566 102626
Organism Murid gammaherpesvirus 4 (MuHV-4) Mus musculus
Category miRNA mRNA
Alias - 3PK//AI874665//MAPKAP-K3//MAPKAP3//MapkKapk3//MK-3//MK3

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Mapkapk3
chr9:107255137-107255138(-) m6A 3'UTR//exon       -
chr9:107256061-107256062(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111
chr9:107256091-107256092(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111
chr9:107256149-107256150(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085
chr9:107256265-107256266(-) m6A 3'UTR//CDS//exon       25683224//25456834//24981863//25569111
chr9:107256273-107256274(-) m6A 3'UTR//CDS//exon       25683224//25456834//24981863//25569111
chr9:107256297-107256298(-) m6A 3'UTR//CDS//exon       25683224//25456834//24981863//25569111
chr9:107257086-107257087(-) m6A CDS//exon       25683224//25456834//24981863//25569111
chr9:107257120-107257121(-) m6A CDS//exon       25569111
chr9:107261899-107261900(-) m6A CDS//exon       25412662
chr9:107261935-107261936(-) m6A CDS//exon       25412662
chr9:107262563-107262564(-) m6A exon//intron       25412662
chr9:107263726-107263727(-) m6A CDS//exon       25412662
chr9:107284914-107284915(-) m6A exon//intron       24981863
chr9:107284984-107284985(-) m6A exon//intron       24981863
chr9:107285011-107285012(-) m6A exon//intron       24981863
chr9:107285065-107285066(-) m6A exon//intron       25683224//24981863
chr9:107289239-107289240(-) m6A CDS//exon       25412662
chr9:107289331-107289332(-) m6A CDS//exon       25412662

Interaction Network (The top 100 interactions):


Interactor1: mghv-miR-M1-3-3p
Interactor2: Mapkapk3

Evidence Support:


Prediction-Evidence cRep
Support Database RepTar

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