Basic Information:

  VIRBase ID:  

VHID00633588

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-3-3p:  MIMAT0001566          Stk40:  NM_028800     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-3-3p	Stk40
miRBase Accession/Entrez ID	MIMAT0001566	74178
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	2310004N11Rik//AI428792

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Stk40	chr4:126104112-126104113(+) m6A 5'UTR//exon       25683224//25412662//25569111 chr4:126117481-126117482(+) m6A 5'UTR//exon//intron       25683224//25412662//25569111 chr4:126117556-126117557(+) m6A 5'UTR//exon//intron       25683224//25412662 chr4:126117588-126117589(+) m6A 5'UTR//exon//intron       25683224 chr4:126123742-126123743(+) m6A CDS       25412662 chr4:126123786-126123787(+) m6A CDS       25412662 chr4:126123821-126123822(+) m6A CDS       25412662 chr4:126138990-126138991(+) m6A CDS       25412662//24981863//25569111 chr4:126139123-126139124(+) m6A 3'UTR       24981863//25569111 chr4:126139166-126139167(+) m6A 3'UTR       24981863//25569111 chr4:126139380-126139381(+) m6A 3'UTR       24981863 chr4:126139519-126139520(+) m6A 3'UTR       24981863 chr4:126139571-126139572(+) m6A 3'UTR       - chr4:126139813-126139814(+) m6A 3'UTR       25569111 chr4:126139828-126139829(+) m6A 3'UTR       25569111 chr4:126139866-126139867(+) m6A 3'UTR       24981863//25569111 chr4:126139888-126139889(+) m6A 3'UTR       24981863//25569111 chr4:126139926-126139927(+) m6A 3'UTR       25683224//24981863//25569111 chr4:126139984-126139985(+) m6A 3'UTR       25683224//24981863//25569111 chr4:126140009-126140010(+) m6A 3'UTR       25683224//24981863//25569111 chr4:126140103-126140104(+) m6A 3'UTR       25683224//24981863//25569111 chr4:126140119-126140120(+) m6A 3'UTR       25683224//24981863//25569111 chr4:126140130-126140131(+) m6A 3'UTR       25683224//24981863//25569111 chr4:126140203-126140204(+) m6A 3'UTR       25683224//24981863//25569111 chr4:126140235-126140236(+) m6A 3'UTR       24981863//25569111

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-3-3p
Interactor2: Stk40

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar