Basic Information:

  VIRBase ID:  

VHID00633216

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-3-3p:  MIMAT0001566          Atg12:  NM_026217     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-3-3p	Atg12
miRBase Accession/Entrez ID	MIMAT0001566	67526
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	4931423H11Rik//A330058M13Rik//Apg//Apg12l//Atg12l

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Atg12	chr18:46732609-46732610(-) m6A 3'UTR       24981863//25569111//26404942 chr18:46732630-46732631(-) m6A 3'UTR       24981863//25569111//26404942 chr18:46732648-46732649(-) m6A 3'UTR       24981863//25569111//26404942 chr18:46732681-46732682(-) m6A 3'UTR       24981863//25569111//26404942 chr18:46732745-46732746(-) m6A 3'UTR       24981863//25569111//22608085//22575960 chr18:46732799-46732800(-) m6A 3'UTR       24981863//22608085 chr18:46733028-46733029(-) m6A 3'UTR       24981863//25456834//25569111//26404942 chr18:46733042-46733043(-) m6A 3'UTR       24981863//25456834//25569111//26404942 chr18:46733050-46733051(-) m6A 3'UTR       24981863//25456834//25569111//26404942 chr18:46733604-46733605(-) m6A 3'UTR       24981863//22608085 chr18:46733645-46733646(-) m6A 3'UTR       24981863//22575960 chr18:46733661-46733662(-) m6A 3'UTR       24981863//22575960 chr18:46733680-46733681(-) m6A 3'UTR       24981863//25569111//22575960 chr18:46733701-46733702(-) m6A 3'UTR       24981863//25569111//22608085 chr18:46733815-46733816(-) m6A 3'UTR       24981863//22608085 chr18:46733902-46733903(-) m6A 3'UTR       24981863//22608085 chr18:46733910-46733911(-) m6A 3'UTR       24981863//22608085 chr18:46734056-46734057(-) m6A 3'UTR       25569111//22608085 chr18:46734115-46734116(-) m6A 3'UTR       24981863 chr18:46734197-46734198(-) m6A 3'UTR       25456834//24981863//25569111//22608085 chr18:46734302-46734303(-) m6A 3'UTR       25456834//24981863//25569111//26404942//22608085 chr18:46734320-46734321(-) m6A 3'UTR       25456834//24981863//25569111//26404942//22608085 chr18:46734342-46734343(-) m6A 3'UTR       25456834//24981863//25569111//26404942//22608085 chr18:46734377-46734378(-) m6A 3'UTR       25456834//24981863//25569111//26404942//22608085 chr18:46734400-46734401(-) m6A 3'UTR       25456834//24981863//25569111//26404942//22608085 chr18:46734437-46734438(-) m6A 3'UTR       25456834//24981863//25569111//26404942 chr18:46734488-46734489(-) m6A CDS       24981863//25569111//26404942 chr18:46735265-46735266(-) m6A CDS       24981863//25569111 chr18:46735279-46735280(-) m6A CDS       24981863//25569111 chr18:46737400-46737401(-) m6A CDS       24981863//25569111 chr18:46737415-46737416(-) m6A CDS       24981863//25569111 chr18:46737445-46737446(-) m6A CDS       24981863//25569111 chr18:46737456-46737457(-) m6A CDS       24981863//25569111 chr18:46737462-46737463(-) m6A CDS       24981863//25569111 chr18:46737486-46737487(-) m6A CDS       24981863//25569111 chr18:46737503-46737504(-) m6A CDS       24981863//25569111 chr18:46741394-46741395(-) m6A CDS       25412662//24981863//25569111 chr18:46741405-46741406(-) m6A CDS       25683224//25412662//24981863//25569111 chr18:46741458-46741459(-) m6A CDS       25683224//25412662//24981863//25569111

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-3-3p
Interactor2: Atg12

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar