Detail Information

Basic Information:


  VIRBase ID:  

VHID00633033

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-3-3p:           Pias4:      

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Interactor Information:


Interactor1 Interactor2
Symbol mghv-miR-M1-3-3p Pias4
miRBase
Accession/Entrez ID
MIMAT0001566 59004
Organism Murid gammaherpesvirus 4 (MuHV-4) Mus musculus
Category miRNA mRNA
Alias - P//Pias-gamma//Piasg//PIASY

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Pias4
chr10:81153393-81153394(-) m6A 3'UTR       25683224//25412662//24981863//25569111
chr10:81153490-81153491(-) m6A 3'UTR       25683224//25412662//24981863//25569111
chr10:81153693-81153694(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085
chr10:81153705-81153706(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085
chr10:81153863-81153864(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr10:81153870-81153871(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr10:81153929-81153930(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22575960
chr10:81153937-81153938(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22575960
chr10:81153951-81153952(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22575960
chr10:81154008-81154009(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111
chr10:81154218-81154219(-) m6A CDS       25683224//25412662//24981863//25569111
chr10:81154230-81154231(-) m6A CDS       25683224//25412662//24981863//25569111
chr10:81157322-81157323(-) m6A CDS//exon       25569111
chr10:81163156-81163157(-) m6A exon//intron       25683224//25456834//25412662//24981863//25569111
chr10:81163711-81163712(-) m6A exon//intron       24981863//25569111
chr10:81163788-81163789(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111
chr10:81163862-81163863(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr10:81163884-81163885(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr10:81163918-81163919(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr10:81163943-81163944(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr10:81164027-81164028(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085
chr10:81164106-81164107(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085
chr10:81164161-81164162(-) m6A CDS//exon       25683224//24981863//25569111

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate Pias4
Cytoplasm Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):


Interactor1: mghv-miR-M1-3-3p
Interactor2: Pias4

Evidence Support:


Prediction-Evidence cRep
Support Database RepTar

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