Basic Information:

  VIRBase ID:  

VHID00632865

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-3-3p:  MIMAT0001566          Nxf1:  NM_001276704     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-3-3p	Nxf1
miRBase Accession/Entrez ID	MIMAT0001566	53319
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	Mex67//Mvb//Mvb1//T//Tap

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Nxf1	chr19:8762762-8762763(+) m6A 3'UTR//CDS//intron       24981863//22608085 chr19:8762809-8762810(+) m6A 3'UTR//CDS//intron       24981863//22608085 chr19:8762819-8762820(+) m6A 3'UTR//CDS//intron       24981863//22608085 chr19:8765753-8765754(+) m6A 3'UTR//intron       25683224//25412662//24981863//25569111 chr19:8765871-8765872(+) m6A 3'UTR//intron       25683224//25412662//24981863//25569111 chr19:8765881-8765882(+) m6A 3'UTR//intron       25683224//25412662//24981863//25569111 chr19:8765915-8765916(+) m6A 3'UTR//intron       25683224//25412662//24981863//25569111 chr19:8765944-8765945(+) m6A 3'UTR//intron       25683224//25412662//24981863//25569111 chr19:8766042-8766043(+) m6A 3'UTR//intron       25412662//25569111 chr19:8766048-8766049(+) m6A 3'UTR//intron       25412662//25569111 chr19:8766061-8766062(+) m6A 3'UTR//intron       25412662//25569111 chr19:8766067-8766068(+) m6A 3'UTR//intron       25412662//25569111 chr19:8769120-8769121(+) m6A 3'UTR//CDS//exon       24981863//22608085 chr19:8769164-8769165(+) m6A 3'UTR//CDS//exon       24981863//22608085 chr19:8770755-8770756(+) m6A 3'UTR//exon       24981863//25569111 chr19:8770766-8770767(+) m6A 3'UTR//exon       24981863//25569111 chr19:8770831-8770832(+) m6A 3'UTR//exon       24981863//25569111//22608085 chr19:8770843-8770844(+) m6A 3'UTR//exon       24981863//25569111//22608085 chr19:8771154-8771155(+) m6A 3'UTR//CDS       25683224//24981863//25569111 chr19:8771185-8771186(+) m6A 3'UTR//CDS       25683224//24981863//25569111 chr19:8771214-8771215(+) m6A 3'UTR//CDS       25683224//24981863//25569111//22608085 chr19:8771246-8771247(+) m6A 3'UTR//CDS       25683224//24981863//25569111//22608085 chr19:8771261-8771262(+) m6A 3'UTR//CDS       25569111//22608085 chr19:8772185-8772186(+) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863 chr19:8772272-8772273(+) m6A 3'UTR//CDS       25683224//25456834//24981863//25569111//22608085 chr19:8772282-8772283(+) m6A 3'UTR//CDS       25683224//25456834//24981863//25569111//22608085 chr19:8772371-8772372(+) m6A 3'UTR       25683224//24981863 chr19:8772389-8772390(+) m6A 3'UTR       24981863 chr19:8772398-8772399(+) m6A 3'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Nxf1	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-3-3p
Interactor2: Nxf1

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar