Basic Information:

  VIRBase ID:  

VHID00632638

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-3-3p:  MIMAT0001566          Ubr1:  NM_009461     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-3-3p	Ubr1
miRBase Accession/Entrez ID	MIMAT0001566	22222
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	AI504731

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Ubr1	chr2:120862457-120862458(-) m6A 3'UTR       24981863//25456834 chr2:120862477-120862478(-) m6A 3'UTR       24981863//25456834 chr2:120862580-120862581(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr2:120862601-120862602(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr2:120862629-120862630(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111 chr2:120862690-120862691(-) m6A CDS//exon       25683224//25456834//24981863//25569111 chr2:120873172-120873173(-) Y CDS//exon       26075521 chr2:120934385-120934386(-) m6A CDS       22608085 chr2:120934402-120934403(-) m6A CDS       22608085 chr2:120934411-120934412(-) m6A CDS       22608085 chr2:120945930-120945931(-) m6A CDS//exon       22608085 chr2:120946293-120946294(-) m6A CDS//exon       22608085 chr2:120950050-120950051(-) m6A CDS//exon       22608085 chr2:120970626-120970627(-) m6A 5'UTR//exon       25412662//25569111

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Ubr1	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-3-3p
Interactor2: Ubr1

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar