Detail Information

Basic Information:


  VIRBase ID:  

VHID00632395

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-3-3p:           Pou3f1:      

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Interactor Information:


Interactor1 Interactor2
Symbol mghv-miR-M1-3-3p Pou3f1
miRBase
Accession/Entrez ID
MIMAT0001566 18991
Organism Murid gammaherpesvirus 4 (MuHV-4) Mus musculus
Category miRNA mRNA
Alias - Oct//Oct-//Oct-6//Oct6//Otf//Otf-6//Otf6//S//Scip//Test1//Tst//Tst-//Tst-1//Tst1

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Pou3f1
chr4:124657972-124657973(+) m6A CDS       25683224//24981863//25569111
chr4:124658251-124658252(+) m6A CDS       25683224//25456834//24981863//25569111
chr4:124658335-124658336(+) m6A CDS       25683224//25456834//24981863//25569111//22608085
chr4:124658347-124658348(+) m6A CDS       25683224//25456834//24981863//25569111//22608085
chr4:124658530-124658531(+) m6A CDS       25683224//25456834//24981863//25569111//22608085
chr4:124658570-124658571(+) m6A CDS       25683224//25456834//24981863//25569111//22608085
chr4:124658613-124658614(+) m6A CDS       25683224//25456834//24981863//25569111//22608085
chr4:124658657-124658658(+) m6A CDS       25683224//25456834//24981863//25569111//22608085
chr4:124658691-124658692(+) m6A CDS       25683224//25456834//24981863//25569111//22608085
chr4:124659064-124659065(+) m6A 3'UTR       25683224//25456834//24981863//25569111
chr4:124659123-124659124(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085
chr4:124659200-124659201(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085
chr4:124659208-124659209(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085
chr4:124659213-124659214(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085
chr4:124659218-124659219(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085
chr4:124659227-124659228(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085
chr4:124659521-124659522(+) m6A 3'UTR       25683224//24981863//25456834//25569111
chr4:124660009-124660010(+) m6A 3'UTR       25683224//24981863
chr4:124660076-124660077(+) m6A 3'UTR       25683224//24981863
chr4:124660092-124660093(+) m6A 3'UTR       25683224//24981863
chr4:124660120-124660121(+) m6A 3'UTR       25683224//24981863
chr4:124660137-124660138(+) m6A 3'UTR       25683224//24981863

Interaction Network (The top 100 interactions):


Interactor1: mghv-miR-M1-3-3p
Interactor2: Pou3f1

Evidence Support:


Prediction-Evidence cRep//Rep
Support Database RepTar

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