Basic Information:

  VIRBase ID:  

VHID00632293

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-3-3p:  MIMAT0001566          Mtf2:  NR_152817     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-3-3p	Mtf2
miRBase Accession/Entrez ID	MIMAT0001566	17765
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	9230112N11Rik//AA537621//C76717//M96//Pc//Pcl2

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	Mtf2	chr5:108527400(+) A-I      intronic chr5:108500851(+) A-I      intronic chr5:108500254(+) A-I      intronic chr5:108506504(+) A-I      intronic chr5:108500267(+) A-I      intronic chr5:108501111(+) A-I      intronic chr5:108500825(+) A-I      intronic chr5:108501121(+) A-I      intronic chr5:108500397(+) A-I      intronic chr5:108500389(+) A-I      intronic chr5:108500251(+) A-I      intronic chr5:108500242(+) A-I      intronic chr5:108506496(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	Mtf2	chr5:108071223(+) A-I intron -    22524474 chr5:108071232(+) A-I intron -    22524474 chr5:108071235(+) A-I intron -    22524474 chr5:108071248(+) A-I intron -    22524474 chr5:108071370(+) A-I intron -    22524474 chr5:108071378(+) A-I intron -    22524474 chr5:108071806(+) A-I intron -    22524474 chr5:108071832(+) A-I intron -    22524474 chr5:108072092(+) A-I intron -    22524474 chr5:108072102(+) A-I intron -    22524474 chr5:108077477(+) A-I intron -    22524474 chr5:108077485(+) A-I intron -    22524474 chr5:108098381(+) A-I intron -    22524474

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Mtf2	chr5:108065727-108065728(+) m6A 5'UTR//exon       25456834//24981863//25412662//25569111//22608085 chr5:108065818-108065819(+) m6A 5'UTR//exon       25456834//24981863//25569111 chr5:108065881-108065882(+) m6A 5'UTR//exon       24981863//25569111 chr5:108067473-108067474(+) m6A exon//intron       25569111 chr5:108069184-108069185(+) m6A exon//intron       25683224//25569111//22608085 chr5:108069267-108069268(+) m6A exon//intron       25683224//25456834//24981863//25569111 chr5:108069347-108069348(+) m6A exon//intron       25683224//25456834//24981863//25569111 chr5:108069360-108069361(+) m6A exon//intron       25683224//25456834//24981863//25569111 chr5:108069461-108069462(+) m6A exon//intron       25456834//24981863//25569111 chr5:108069470-108069471(+) m6A exon//intron       25456834//24981863//25569111 chr5:108069477-108069478(+) m6A exon//intron       25456834 chr5:108078183-108078184(+) m6A exon//intron       25683224//24981863 chr5:108078216-108078217(+) m6A exon//intron       25683224//24981863 chr5:108078265-108078266(+) m6A exon//intron       25683224//25456834 chr5:108078283-108078284(+) m6A exon//intron       25683224//25456834 chr5:108078333-108078334(+) m6A exon//intron       25683224//25456834 chr5:108094193-108094194(+) m6A 3'UTR//CDS//exon//intron       22608085 chr5:108094222-108094223(+) m6A 3'UTR//CDS//exon//intron       22608085 chr5:108099125-108099126(+) m6A 3'UTR//CDS//exon       22608085 chr5:108099181-108099182(+) m6A 3'UTR//CDS//exon       24981863//22608085 chr5:108100914-108100915(+) m6A 3'UTR//CDS//exon//intron       24981863 chr5:108100924-108100925(+) m6A 3'UTR//CDS//exon//intron       24981863 chr5:108100965-108100966(+) m6A 3'UTR//CDS//exon//intron       24981863 chr5:108104429-108104430(+) m6A 3'UTR//CDS//exon       25569111 chr5:108104469-108104470(+) m6A 3'UTR//CDS//exon       25569111 chr5:108104498-108104499(+) m6A 3'UTR//CDS//exon       24981863//25569111 chr5:108106595-108106596(+) m6A 3'UTR//CDS//exon       25683224//25456834//24981863//25569111 chr5:108106609-108106610(+) m6A 3'UTR//CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr5:108106690-108106691(+) m6A 3'UTR//CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr5:108106697-108106698(+) m6A 3'UTR//CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr5:108106749-108106750(+) m6A 3'UTR//CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr5:108106811-108106812(+) m6A 3'UTR//CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr5:108106952-108106953(+) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr5:108106989-108106990(+) Y 3'UTR//exon       26075521 chr5:108107009-108107010(+) m6A 3'UTR//exon       25683224//25456834//24981863//25569111 chr5:108107016-108107017(+) m6A 3'UTR//exon       25683224//25456834//24981863//25569111 chr5:108107050-108107051(+) m6A 3'UTR//exon       25683224//25456834//24981863//25569111 chr5:108107065-108107066(+) m6A 3'UTR//exon       25456834//24981863//25569111 chr5:108107106-108107107(+) m6A 3'UTR//exon       25456834//24981863//25569111 chr5:108107172-108107173(+) m6A 3'UTR//exon       24981863//25456834//25569111 chr5:108107203-108107204(+) m6A 3'UTR//exon       25569111 chr5:108107227-108107228(+) m6A 3'UTR//exon       25569111 chr5:108107314-108107315(+) m6A 3'UTR//exon       25569111 chr5:108107348-108107349(+) m6A 3'UTR//exon       25569111 chr5:108107441-108107442(+) m6A 3'UTR//exon       25569111 chr5:108107516-108107517(+) m6A 3'UTR//exon       25569111

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Mtf2	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-3-3p
Interactor2: Mtf2

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar