Detail Information

Basic Information:


  VIRBase ID:  

VHID00632222

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-3-3p:           Lad1:      

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Interactor Information:


Interactor1 Interactor2
Symbol mghv-miR-M1-3-3p Lad1
miRBase
Accession/Entrez ID
MIMAT0001566 16763
Organism Murid gammaherpesvirus 4 (MuHV-4) Mus musculus
Category miRNA mRNA
Alias - lad-1//LADA

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Lad1
chr1:135818997-135818998(+) m6A CDS       25683224//24981863
chr1:135825770-135825771(+) m6A CDS       25683224//24981863
chr1:135825856-135825857(+) m6A CDS       25683224//25412662//24981863
chr1:135827231-135827232(+) m6A CDS       25683224//24981863
chr1:135827251-135827252(+) m6A CDS       25683224//25456834//24981863
chr1:135827268-135827269(+) m6A CDS       25683224//25456834//24981863
chr1:135827339-135827340(+) m6A CDS       25683224//25456834//24981863//25569111
chr1:135827359-135827360(+) m6A CDS       25683224//25456834//24981863//25569111
chr1:135827415-135827416(+) m6A CDS       25683224//25456834//24981863//25569111
chr1:135827468-135827469(+) m6A CDS       25683224//25456834//24981863//25569111
chr1:135827527-135827528(+) m6A CDS       25683224//25456834//24981863//25569111
chr1:135827563-135827564(+) m6A CDS       25683224//25456834//24981863//25569111
chr1:135827583-135827584(+) m6A CDS       25683224//25456834//24981863//25569111
chr1:135827620-135827621(+) m6A CDS       25683224//25456834//24981863//25569111
chr1:135827655-135827656(+) m6A CDS       25683224//25456834//24981863//25569111
chr1:135827686-135827687(+) m6A CDS       25683224//25456834//24981863//25569111
chr1:135827908-135827909(+) m6A CDS       25683224//24981863
chr1:135828745-135828746(+) m6A CDS       25683224//24981863
chr1:135828804-135828805(+) m6A CDS       25683224//24981863
chr1:135829704-135829705(+) m6A CDS       25683224//24981863
chr1:135829715-135829716(+) m6A CDS       25683224//24981863
chr1:135830001-135830002(+) m6A exon//intron       25683224//24981863
chr1:135832335-135832336(+) m6A 3'UTR//exon       24981863
chr1:135832343-135832344(+) m6A 3'UTR//exon       24981863
chr1:135832390-135832391(+) m6A 3'UTR//exon       24981863
chr1:135832407-135832408(+) m6A 3'UTR//exon       24981863
chr1:135832463-135832464(+) m6A 3'UTR//exon       24981863
chr1:135832500-135832501(+) m6A 3'UTR//exon       24981863
chr1:135832523-135832524(+) m6A 3'UTR//exon       24981863
chr1:135832559-135832560(+) m6A 3'UTR//exon       24981863
chr1:135832624-135832625(+) m6A 3'UTR//exon       24981863
chr1:135832752-135832753(+) m6A 3'UTR       24981863
chr1:135832788-135832789(+) m6A 3'UTR       24981863
chr1:135832873-135832874(+) m6A 3'UTR       24981863
chr1:135832921-135832922(+) m6A 3'UTR       24981863
chr1:135832946-135832947(+) m6A 3'UTR       24981863

Interaction Network (The top 100 interactions):


Interactor1: mghv-miR-M1-3-3p
Interactor2: Lad1

Evidence Support:


Prediction-Evidence cRep//Rep
Support Database RepTar

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