Detail Information

Basic Information:


  VIRBase ID:  

VHID00631916

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-3-3p:           Csnk2a2:      

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Interactor Information:


Interactor1 Interactor2
Symbol mghv-miR-M1-3-3p Csnk2a2
miRBase
Accession/Entrez ID		 MIMAT0001566 13000
Organism Murid gammaherpesvirus 4 (MuHV-4) Mus musculus
Category miRNA mRNA
Alias - 1110035J23Rik//C77789//CK2

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Csnk2a2
chr8:95446285-95446286(-) m6A 3'UTR       25412662
chr8:95447911-95447912(-) m6A 3'UTR       25456834
chr8:95447920-95447921(-) m6A 3'UTR       25456834
chr8:95447928-95447929(-) m6A 3'UTR       25456834
chr8:95448066-95448067(-) m6A 3'UTR       25683224//25412662//24981863//25456834//25569111
chr8:95448081-95448082(-) m6A 3'UTR       25683224//25412662//24981863//25456834//25569111
chr8:95448090-95448091(-) m6A 3'UTR       25683224//25412662//24981863//25456834//25569111
chr8:95448253-95448254(-) m6A 3'UTR       24981863//25569111
chr8:95448287-95448288(-) m6A 3'UTR       24981863//25569111
chr8:95448292-95448293(-) m6A 3'UTR       24981863//25569111
chr8:95448298-95448299(-) m6A 3'UTR       24981863//25569111
chr8:95448324-95448325(-) m6A 3'UTR       24981863//25569111
chr8:95449213-95449214(-) m6A 3'UTR//intron       22608085
chr8:95450086-95450087(-) m6A 3'UTR//intron       24981863//22608085
chr8:95452898-95452899(-) m6A 3'UTR//intron       25412662//24981863//25456834//25569111
chr8:95453135-95453136(-) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//22608085
chr8:95453205-95453206(-) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//22608085
chr8:95453230-95453231(-) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//22608085
chr8:95453289-95453290(-) m6A 3'UTR//intron       25456834//24981863//25569111//22608085
chr8:95453300-95453301(-) m6A 3'UTR//intron       25456834//24981863//25569111//22608085
chr8:95453306-95453307(-) m6A 3'UTR//intron       25456834//24981863//25569111//22608085
chr8:95453319-95453320(-) m6A 3'UTR//intron       25456834//24981863//25569111
chr8:95453403-95453404(-) m6A CDS       24981863//25569111
chr8:95473414-95473415(-) m6A 3'UTR//CDS//exon//intron       -
chr8:95477218-95477219(-) m6A 3'UTR//CDS//exon//intron       22608085
chr8:95477252-95477253(-) m6A 3'UTR//CDS//exon//intron       22608085
chr8:95477266-95477267(-) m6A 3'UTR//CDS//exon//intron       22608085
chr8:95487645-95487646(-) m6A CDS//exon       25412662
chr8:95487733-95487734(-) m6A exon//intron       25412662
chr8:95488311-95488312(-) m6A exon//intron       25412662//25569111
chr8:95488370-95488371(-) m6A CDS//exon//intron       25412662//25569111
chr8:95488397-95488398(-) m6A CDS//exon//intron       25412662//25569111
chr8:95488700-95488701(-) m6A 5'UTR//exon//intron       25412662

Interaction Network (The top 100 interactions):


Interactor1: mghv-miR-M1-3-3p
Interactor2: Csnk2a2

Evidence Support:


Prediction-Evidence cRep
Support Database RepTar

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