Basic Information:

  VIRBase ID:  

VHID00631649

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-2-3p:  MIMAT0001565          Med13:  NM_001080931     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-2-3p	Med13
miRBase Accession/Entrez ID	MIMAT0001565	327987
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	1110067M05Rik//D030023K18//Thr//Thrap1//Trap//Trap240

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Med13	chr11:86268615-86268616(-) m6A 3'UTR       24981863//22608085 chr11:86268651-86268652(-) m6A 3'UTR       24981863//22608085 chr11:86269674-86269675(-) m6A 3'UTR       24981863//25456834 chr11:86269845-86269846(-) m6A 3'UTR       24981863 chr11:86270621-86270622(-) m6A 3'UTR       25569111 chr11:86270649-86270650(-) m6A 3'UTR       24981863//25569111 chr11:86270658-86270659(-) m6A 3'UTR       25456834//24981863//25569111 chr11:86271058-86271059(-) m6A CDS       24981863//25569111 chr11:86271105-86271106(-) m6A CDS       24981863//25569111 chr11:86272478-86272479(-) m6A CDS       24981863//25569111 chr11:86272489-86272490(-) m6A CDS       24981863//25569111 chr11:86272506-86272507(-) m6A CDS       24981863//25569111 chr11:86279608-86279609(-) m6A CDS       25683224//24981863//22608085 chr11:86279668-86279669(-) m6A CDS       25683224//22608085 chr11:86286519-86286520(-) m6A CDS       25569111 chr11:86286583-86286584(-) m6A CDS       24981863//25569111 chr11:86286615-86286616(-) m6A CDS       24981863//25569111 chr11:86286706-86286707(-) Y CDS//exon       26075521 chr11:86286862-86286863(-) m6A CDS       - chr11:86288196-86288197(-) m6A CDS       22608085 chr11:86288256-86288257(-) m6A CDS       22608085 chr11:86289052-86289053(-) m6A CDS       25569111//22608085 chr11:86289136-86289137(-) m6A CDS       25569111//22608085 chr11:86289153-86289154(-) m6A CDS       25569111//22608085 chr11:86291117-86291118(-) m6A CDS       24981863//25569111 chr11:86298373-86298374(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr11:86298404-86298405(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr11:86298464-86298465(-) m6A CDS       25683224//25456834//24981863//25569111//22608085//22575960 chr11:86298623-86298624(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr11:86298649-86298650(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr11:86298692-86298693(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr11:86298746-86298747(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr11:86298824-86298825(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr11:86298863-86298864(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr11:86298910-86298911(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr11:86298965-86298966(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr11:86299026-86299027(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr11:86299035-86299036(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr11:86299044-86299045(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr11:86299146-86299147(-) m6A CDS       25683224//25456834//24981863//25569111 chr11:86299172-86299173(-) m6A CDS       25683224//25456834//24981863//25569111 chr11:86300691-86300692(-) m6A CDS       25683224//24981863//25569111 chr11:86300707-86300708(-) m6A CDS       25683224//24981863//25569111 chr11:86300773-86300774(-) m6A CDS       25683224//25569111//22608085 chr11:86301144-86301145(-) m6A CDS       25683224//25569111//22608085 chr11:86301221-86301222(-) m6A CDS       25683224//24981863//22608085 chr11:86301238-86301239(-) m6A CDS       25683224//24981863//22608085 chr11:86301297-86301298(-) m6A CDS       25683224 chr11:86301334-86301335(-) m6A CDS       25683224 chr11:86301494-86301495(-) m6A CDS       25683224//22608085 chr11:86306987-86306988(-) m6A CDS       24981863//22608085 chr11:86307049-86307050(-) m6A CDS       24981863//22608085 chr11:86308704-86308705(-) m6A CDS       24981863//22608085 chr11:86308734-86308735(-) m6A CDS       24981863//22608085 chr11:86308803-86308804(-) m6A CDS       - chr11:86308809-86308810(-) m6A CDS       - chr11:86319373-86319374(-) m6A CDS       - chr11:86319382-86319383(-) m6A CDS       - chr11:86319529-86319530(-) m6A CDS       25683224//24981863//25569111 chr11:86319575-86319576(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr11:86319595-86319596(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr11:86319663-86319664(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr11:86319736-86319737(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr11:86319759-86319760(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr11:86319777-86319778(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr11:86319785-86319786(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr11:86319826-86319827(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr11:86319848-86319849(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr11:86319926-86319927(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr11:86319942-86319943(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr11:86319991-86319992(-) m6A CDS       25456834//24981863//25569111//22608085 chr11:86320014-86320015(-) m6A CDS       25456834//24981863//25569111//22608085 chr11:86327820-86327821(-) m6A CDS       25456834//24981863//25569111 chr11:86327843-86327844(-) m6A CDS       25456834//24981863//25569111 chr11:86327868-86327869(-) m6A CDS       25569111 chr11:86328449-86328450(-) m6A CDS       25569111//22608085 chr11:86328461-86328462(-) m6A CDS       25569111//22608085 chr11:86329170-86329171(-) m6A CDS       25569111//22608085 chr11:86355352-86355353(-) m6A CDS       25683224//22608085 chr11:86355422-86355423(-) m6A CDS       25683224//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Med13	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-2-3p
Interactor2: Med13

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar