Basic Information:

  VIRBase ID:  

VHID00631385

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-2-3p:  MIMAT0001565          Asxl1:  NM_001039939     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-2-3p	Asxl1
miRBase Accession/Entrez ID	MIMAT0001565	228790
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	-

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Asxl1	chr2:153345885-153345886(+) m6A 5'UTR       25683224//24981863//25456834//25569111 chr2:153346294-153346295(+) m6A 5'UTR       25412662//24981863 chr2:153346340-153346341(+) m6A CDS       25683224//25412662//24981863//25569111 chr2:153346357-153346358(+) m1A CDS       26863196 chr2:153347702-153347703(+) m6A exon//intron       25683224//24981863//25569111 chr2:153347708-153347709(+) m6A exon//intron       25683224//24981863//25569111 chr2:153347767-153347768(+) m6A exon//intron       25683224 chr2:153347808-153347809(+) m6A exon//intron       25683224 chr2:153348023-153348024(+) m6A exon//intron       24981863 chr2:153352198-153352199(+) m6A CDS//exon       25683224//24981863 chr2:153352226-153352227(+) m6A CDS//exon       25683224 chr2:153352256-153352257(+) m6A CDS//exon       25683224 chr2:153357073-153357074(+) m6A CDS//exon       25683224 chr2:153391586-153391587(+) m6A CDS//exon       25683224//22608085 chr2:153391738-153391739(+) m6A CDS       25683224//22608085 chr2:153391799-153391800(+) m6A CDS       25683224//22608085 chr2:153392844-153392845(+) m6A CDS       25683224//22608085 chr2:153392861-153392862(+) m6A CDS//exon       25683224 chr2:153392923-153392924(+) m6A CDS//exon       25683224 chr2:153393459-153393460(+) m6A CDS//exon       25683224//25412662 chr2:153393550-153393551(+) m6A exon//intron       25683224 chr2:153393586-153393587(+) m6A exon//intron       25683224 chr2:153393616-153393617(+) m6A exon//intron       25683224 chr2:153393710-153393711(+) m6A CDS//exon       25683224 chr2:153393718-153393719(+) m6A CDS//exon       25683224 chr2:153393779-153393780(+) m6A CDS//exon       25683224 chr2:153396765-153396766(+) m6A CDS//exon       25683224//25412662//24981863 chr2:153396795-153396796(+) m6A CDS//exon       25683224//25412662//24981863//25569111 chr2:153396831-153396832(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111 chr2:153397507-153397508(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr2:153397541-153397542(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr2:153397570-153397571(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr2:153397582-153397583(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr2:153397646-153397647(+) m6A CDS       25683224//25456834//24981863//25569111//22608085//22575960 chr2:153397665-153397666(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:153397705-153397706(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:153397732-153397733(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:153397764-153397765(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr2:153397794-153397795(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr2:153397818-153397819(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr2:153397835-153397836(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr2:153397897-153397898(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr2:153399258-153399259(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr2:153399343-153399344(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:153399355-153399356(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:153399365-153399366(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:153399503-153399504(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr2:153399598-153399599(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr2:153399677-153399678(+) m6A CDS       25683224//25412662//24981863//25569111 chr2:153399785-153399786(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr2:153399823-153399824(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr2:153399877-153399878(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:153399909-153399910(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:153400125-153400126(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr2:153400207-153400208(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr2:153400232-153400233(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr2:153400339-153400340(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:153400391-153400392(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:153400401-153400402(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:153400490-153400491(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr2:153400559-153400560(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr2:153400565-153400566(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:153400592-153400593(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:153400618-153400619(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:153400685-153400686(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:153400872-153400873(+) m6A CDS       24981863//25569111 chr2:153400913-153400914(+) m6A CDS       24981863//25569111 chr2:153400954-153400955(+) m6A CDS       25683224//25412662//24981863//25569111 chr2:153401072-153401073(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr2:153401089-153401090(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr2:153401094-153401095(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr2:153401302-153401303(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr2:153401311-153401312(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr2:153401327-153401328(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr2:153401352-153401353(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr2:153401410-153401411(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr2:153401460-153401461(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr2:153401471-153401472(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr2:153401494-153401495(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr2:153401507-153401508(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr2:153401520-153401521(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr2:153401551-153401552(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr2:153401560-153401561(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr2:153401597-153401598(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr2:153401628-153401629(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr2:153401784-153401785(+) m6A CDS       25683224//24981863//25569111//22608085 chr2:153402033-153402034(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr2:153402092-153402093(+) m6A 3'UTR       25683224//25456834//24981863//25569111 chr2:153402168-153402169(+) m6A 3'UTR       24981863//25569111 chr2:153402183-153402184(+) m6A 3'UTR       24981863//25569111 chr2:153402301-153402302(+) m6A 3'UTR       25683224//25456834//24981863//25569111 chr2:153402308-153402309(+) m6A 3'UTR       25683224//25456834//24981863//25569111 chr2:153402366-153402367(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr2:153402408-153402409(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr2:153402422-153402423(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr2:153402549-153402550(+) m6A 3'UTR       25456834//24981863//25569111 chr2:153402639-153402640(+) m6A 3'UTR       25683224//25456834//24981863//25569111 chr2:153402700-153402701(+) m6A 3'UTR       25683224//25456834//24981863//25569111 chr2:153402751-153402752(+) m6A 3'UTR       25683224//24981863//25569111

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Asxl1	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-2-3p
Interactor2: Asxl1

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar