Basic Information:

  VIRBase ID:  

VHID00631305

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-2-3p:  MIMAT0001565          Tmc6:  NM_145439     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-2-3p	Tmc6
miRBase Accession/Entrez ID	MIMAT0001565	217353
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	D11Ertd204//D11Ertd204e//EVE//EVER1

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Tmc6	chr11:117766026-117766027(-) m6A 3'UTR       25683224 chr11:117766139-117766140(-) m6A 3'UTR//exon       25683224//24981863//25456834//25569111 chr11:117766176-117766177(-) m6A 3'UTR//exon       25683224//24981863//25456834//25412662//25569111 chr11:117766221-117766222(-) m6A 3'UTR//exon       25683224//25412662//24981863//25456834//25569111 chr11:117766227-117766228(-) m6A 3'UTR//exon       25683224//25412662//24981863//25456834//25569111 chr11:117766266-117766267(-) m6A 3'UTR//CDS//exon       25683224//25412662//24981863//25569111 chr11:117766276-117766277(-) m6A 3'UTR//CDS//exon       25683224//25412662//24981863//25569111 chr11:117766305-117766306(-) m6A 3'UTR//CDS//exon       25683224//25412662//24981863//25569111 chr11:117766315-117766316(-) m6A 3'UTR//CDS//exon       25683224//25412662//24981863 chr11:117766322-117766323(-) m6A 3'UTR//CDS//exon       25683224//25412662//24981863 chr11:117766776-117766777(-) m6A 3'UTR//intron       25683224//25412662//24981863 chr11:117766828-117766829(-) m6A 3'UTR//intron       25683224//25412662//24981863 chr11:117766841-117766842(-) m6A 3'UTR//intron       25683224//25412662 chr11:117767622-117767623(-) m6A 3'UTR//CDS//exon       25412662 chr11:117768963-117768964(-) m6A 3'UTR//CDS//exon       25412662 chr11:117769141-117769142(-) m6A 3'UTR//CDS       25569111 chr11:117776273-117776274(-) m6A CDS       25412662 chr11:117776288-117776289(-) m6A CDS       25412662 chr11:117778774-117778775(-) m6A CDS       25412662 chr11:117778785-117778786(-) m6A CDS       25412662 chr11:117780566-117780567(-) m6A 5'UTR//intron       24981863//25569111 chr11:117780617-117780618(-) m6A 5'UTR//intron       25569111 chr11:117780626-117780627(-) m6A 5'UTR//intron       25569111 chr11:117780912-117780913(-) m6A 5'UTR//intron       25569111

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-2-3p
Interactor2: Tmc6

Evidence Support:

Prediction-Evidence	Rep
Support Database	RepTar