Basic Information:

  VIRBase ID:  

VHID00630712

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-2-3p:  MIMAT0001565          Sf3a1:  NM_026175     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-2-3p	Sf3a1
miRBase Accession/Entrez ID	MIMAT0001565	67465
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	1200014H24Rik//5930416L09Rik//AI159724

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Sf3a1	chr11:4160462-4160463(+) m6A 5'UTR//exon       24981863//25569111 chr11:4160498-4160499(+) m6A CDS//exon       24981863//25569111 chr11:4160546-4160547(+) m6A CDS//exon       24981863//25569111 chr11:4161055-4161056(+) m1A CDS//exon       26863196 chr11:4167656-4167657(+) m6A CDS//exon//intron       25683224//25569111//22608085 chr11:4171131-4171132(+) m6A CDS//exon       24981863//22608085 chr11:4171140-4171141(+) m6A exon//intron       24981863//22608085 chr11:4173202-4173203(+) m6A CDS       25683224//25412662//24981863 chr11:4174034-4174035(+) m6A CDS       25683224//25412662//24981863 chr11:4174062-4174063(+) m6A CDS       25683224//25412662//24981863 chr11:4174171-4174172(+) m6A CDS       25683224//25412662//24981863 chr11:4174187-4174188(+) m6A CDS       25683224//25412662//24981863 chr11:4174208-4174209(+) m6A CDS       25683224//25412662//24981863//22608085 chr11:4175051-4175052(+) m1A CDS       26863196 chr11:4175083-4175084(+) m6A CDS       25683224//25412662//24981863//22608085 chr11:4175117-4175118(+) m6A CDS       25683224//25412662//24981863//22608085 chr11:4175138-4175139(+) m6A CDS       25683224//25412662//24981863//22608085 chr11:4175532-4175533(+) m6A CDS       25683224//24981863//22608085 chr11:4176337-4176338(+) m6A CDS       25683224//25412662//24981863//22608085 chr11:4176516-4176517(+) m6A CDS       25683224//25412662//24981863//22608085 chr11:4180155-4180156(+) m6A 3'UTR       24981863 chr11:4180336-4180337(+) m6A 3'UTR       24981863//25569111 chr11:4180457-4180458(+) m6A 3'UTR       25683224//24981863//25569111//22608085 chr11:4180524-4180525(+) m6A 3'UTR       25683224//24981863//25569111//22608085 chr11:4180607-4180608(+) m6A 3'UTR       25683224//24981863//25569111 chr11:4180612-4180613(+) m6A 3'UTR       25683224//24981863//25569111 chr11:4180623-4180624(+) m6A 3'UTR       24981863//25569111 chr11:4180659-4180660(+) m6A 3'UTR       24981863//25569111 chr11:4180727-4180728(+) m6A 3'UTR       24981863//25569111 chr11:4180761-4180762(+) m6A 3'UTR       25569111 chr11:4182147-4182148(+) m6A 3'UTR       - chr11:4182189-4182190(+) m6A 3'UTR       -

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-2-3p
Interactor2: Sf3a1

Evidence Support:

Prediction-Evidence	Rep
Support Database	RepTar