Basic Information:

  VIRBase ID:  

VHID00630463

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-2-3p:  MIMAT0001565          Slamf1:  NM_013730     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-2-3p	Slamf1
miRBase Accession/Entrez ID	MIMAT0001565	27218
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	4933415F16//AA177906//CD150//CDw150//ESTM5//ESTM51//IP//IPO-3//S//Slam

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Slamf1	chr1:171767203-171767204(+) m6A 5'UTR//exon       24981863 chr1:171774878-171774879(+) m6A CDS//exon       24981863 chr1:171798182-171798183(+) m6A CDS       24981863 chr1:171799574-171799575(+) m6A CDS       24981863 chr1:171799579-171799580(+) m6A CDS       24981863 chr1:171799643-171799644(+) m6A 3'UTR       24981863 chr1:171799666-171799667(+) m6A 3'UTR       24981863 chr1:171799683-171799684(+) m6A 3'UTR       24981863 chr1:171799921-171799922(+) m6A 3'UTR       24981863 chr1:171799934-171799935(+) m6A 3'UTR       24981863 chr1:171799946-171799947(+) m6A 3'UTR       24981863 chr1:171799961-171799962(+) m6A 3'UTR       24981863 chr1:171799967-171799968(+) m6A 3'UTR       24981863 chr1:171800020-171800021(+) m6A 3'UTR       24981863 chr1:171800106-171800107(+) m6A 3'UTR       24981863 chr1:171800157-171800158(+) m6A 3'UTR       24981863 chr1:171800177-171800178(+) m6A 3'UTR       24981863 chr1:171800199-171800200(+) m6A 3'UTR       24981863 chr1:171800234-171800235(+) m6A 3'UTR       24981863 chr1:171800343-171800344(+) m6A 3'UTR       24981863 chr1:171800380-171800381(+) m6A 3'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Slamf1	Cytoplasm Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-2-3p
Interactor2: Slamf1

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar