Basic Information:

  VIRBase ID:  

VHID00630462

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-2-3p:  MIMAT0001565          Dbf4:  NM_013726     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-2-3p	Dbf4
miRBase Accession/Entrez ID	MIMAT0001565	27214
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	A//AA545217//Ask

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Dbf4	chr5:8397322-8397323(-) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr5:8397371-8397372(-) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr5:8397382-8397383(-) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr5:8397413-8397414(-) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr5:8397418-8397419(-) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr5:8397443-8397444(-) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr5:8397471-8397472(-) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr5:8397547-8397548(-) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111 chr5:8397593-8397594(-) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111 chr5:8397712-8397713(-) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111 chr5:8397768-8397769(-) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr5:8397799-8397800(-) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr5:8397810-8397811(-) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr5:8397843-8397844(-) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr5:8397924-8397925(-) m6A 3'UTR//CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr5:8397999-8398000(-) m6A 3'UTR//CDS//exon       25683224//25456834//25412662//24981863//25569111 chr5:8398007-8398008(-) m6A 3'UTR//CDS//exon       25683224//25456834//25412662//24981863//25569111 chr5:8398024-8398025(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111 chr5:8398108-8398109(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111 chr5:8398340-8398341(-) m6A 3'UTR//intron       25683224//25569111 chr5:8399705-8399706(-) m6A CDS//exon//intron       - chr5:8399786-8399787(-) m6A CDS//exon//intron       - chr5:8399794-8399795(-) m6A CDS//exon//intron       - chr5:8403081-8403082(-) m6A CDS//exon       24981863 chr5:8403162-8403163(-) m6A CDS//exon       24981863 chr5:8403570-8403571(-) m6A exon//intron       24981863 chr5:8403599-8403600(-) m6A exon//intron       24981863 chr5:8403631-8403632(-) m6A CDS//exon       24981863 chr5:8403692-8403693(-) m6A CDS//exon       24981863 chr5:8405807-8405808(-) m6A CDS//exon       25412662 chr5:8408290-8408291(-) m6A CDS//exon       25412662 chr5:8418456-8418457(-) m6A exon//intron       25569111 chr5:8418478-8418479(-) m6A exon//intron       25569111 chr5:8420250-8420251(-) m6A exon//intron       - chr5:8420265-8420266(-) m6A exon//intron       - chr5:8420286-8420287(-) m6A exon//intron       - chr5:8421229-8421230(-) m6A CDS//exon       25569111 chr5:8421250-8421251(-) m6A CDS//exon       24981863//25569111 chr5:8421328-8421329(-) m6A CDS//exon       24981863//25569111 chr5:8421380-8421381(-) m6A CDS//exon       24981863//25569111 chr5:8422225-8422226(-) m6A exon//intron       24981863//25569111 chr5:8422499-8422500(-) m6A CDS//exon       25569111 chr5:8422507-8422508(-) m6A CDS//exon       25569111 chr5:8422540-8422541(-) m6A 5'UTR//exon       25569111 chr5:8422646-8422647(-) m6A 5'UTR//exon       24981863//25456834//25569111

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Dbf4	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-2-3p
Interactor2: Dbf4

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar