Detail Information

Basic Information:


  VIRBase ID:  

VHID00630453

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-2-3p:           Serinc3:      

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Interactor Information:


Interactor1 Interactor2
Symbol mghv-miR-M1-2-3p Serinc3
miRBase
Accession/Entrez ID
MIMAT0001565 26943
Organism Murid gammaherpesvirus 4 (MuHV-4) Mus musculus
Category miRNA mRNA
Alias - AA959945//AA960047//AI//AIGP1//DIFF3//DIFF33//Tde1//TMS-//TMS-1

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR Serinc3
chr2:163460599(-) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Serinc3
chr2:163625423-163625424(-) m6A 3'UTR       24981863//25569111//22608085//22575960
chr2:163625450-163625451(-) m6A CDS       24981863//25569111//22608085//22575960
chr2:163625484-163625485(-) m6A CDS       24981863//25569111//22608085//22575960
chr2:163626351-163626352(-) m6A CDS       25569111//22608085
chr2:163626371-163626372(-) m6A CDS       25569111//22608085
chr2:163629130-163629131(-) m6A CDS       24981863//22608085
chr2:163629214-163629215(-) m6A CDS       22608085//22575960
chr2:163630998-163630999(-) m6A CDS       22608085//22575960
chr2:163632125-163632126(-) m6A CDS       25569111//22608085//22575960
chr2:163639179-163639180(-) m6A CDS//exon       25569111//22608085
chr2:163643159-163643160(-) m6A exon//intron       24981863//25569111//22608085//22575960
chr2:163643177-163643178(-) m6A exon//intron       24981863//25569111//22608085//22575960
chr2:163643185-163643186(-) m6A exon//intron       24981863//25569111//22608085//22575960
chr2:163643198-163643199(-) m6A exon//intron       24981863//25569111//22575960
chr2:163643233-163643234(-) m6A exon//intron       24981863//25569111//22575960
chr2:163643281-163643282(-) m6A exon//intron       24981863//25569111//22575960

Interaction Network (The top 100 interactions):


Interactor1: mghv-miR-M1-2-3p
Interactor2: Serinc3

Evidence Support:


Prediction-Evidence Rep
Support Database RepTar

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