Detail Information

Basic Information:


  VIRBase ID:  

VHID00630441

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-2-3p:           Plod2:      

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Interactor Information:


Interactor1 Interactor2
Symbol mghv-miR-M1-2-3p Plod2
miRBase
Accession/Entrez ID
MIMAT0001565 26432
Organism Murid gammaherpesvirus 4 (MuHV-4) Mus musculus
Category miRNA mRNA
Alias - D530025C14Rik//LH//LH2//Plo//Plod-2

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Plod2
chr9:92542288-92542289(+) m6A 5'UTR       25412662
chr9:92542466-92542467(+) m6A CDS       25412662
chr9:92606807-92606808(+) m6A CDS       25569111
chr9:92607175-92607176(+) m6A CDS       25683224//25456834//24981863//25569111//22608085
chr9:92607194-92607195(+) m6A CDS       25683224//25456834//24981863//25569111//22608085
chr9:92607248-92607249(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085
chr9:92607283-92607284(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085
chr9:92607311-92607312(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085
chr9:92607334-92607335(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085
chr9:92607362-92607363(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085
chr9:92607417-92607418(+) m6A 3'UTR       25456834//24981863//25569111
chr9:92607577-92607578(+) m6A 3'UTR       25569111
chr9:92607642-92607643(+) m6A 3'UTR       25569111

Interaction Network (The top 100 interactions):


Interactor1: mghv-miR-M1-2-3p
Interactor2: Plod2

Evidence Support:


Prediction-Evidence cRep
Support Database RepTar

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