Detail Information

Basic Information:


  VIRBase ID:  

VHID00630187

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-2-3p:           Oprd1:      

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Interactor Information:


Interactor1 Interactor2
Symbol mghv-miR-M1-2-3p Oprd1
miRBase
Accession/Entrez ID
MIMAT0001565 18386
Organism Murid gammaherpesvirus 4 (MuHV-4) Mus musculus
Category miRNA mRNA
Alias - D//DOR//DOR-1//mD//mDOR//N//Nbor

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR Oprd1
chr4:131668139(-) A-I      3'UTR
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED Oprd1
chr4:132112224(-) A-I exon 3'UTR    22524474

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Oprd1
chr4:132111958-132111959(-) m6A 3'UTR       25456834//24981863
chr4:132111971-132111972(-) m6A 3'UTR       25456834//24981863
chr4:132112309-132112310(-) m6A 3'UTR       24981863
chr4:132112317-132112318(-) m6A 3'UTR       24981863
chr4:132112359-132112360(-) m6A 3'UTR       24981863
chr4:132112365-132112366(-) m6A 3'UTR       24981863
chr4:132112462-132112463(-) m6A 3'UTR       24981863
chr4:132112511-132112512(-) m6A 3'UTR       24981863
chr4:132112547-132112548(-) m6A 3'UTR       24981863
chr4:132112556-132112557(-) m6A 3'UTR       24981863
chr4:132112586-132112587(-) m6A 3'UTR       24981863
chr4:132112621-132112622(-) m6A 3'UTR       24981863
chr4:132112653-132112654(-) m6A 3'UTR       24981863
chr4:132112688-132112689(-) m6A 3'UTR       24981863
chr4:132112696-132112697(-) m6A 3'UTR       24981863
chr4:132112708-132112709(-) m6A 3'UTR       24981863
chr4:132112716-132112717(-) m6A 3'UTR       24981863
chr4:132112725-132112726(-) m6A 3'UTR       24981863
chr4:132112743-132112744(-) m6A 3'UTR       24981863
chr4:132112748-132112749(-) m6A 3'UTR       24981863
chr4:132113102-132113103(-) m6A 3'UTR       24981863
chr4:132113200-132113201(-) m6A 3'UTR       25456834//24981863//22608085
chr4:132113223-132113224(-) m6A 3'UTR       25456834//24981863//22608085
chr4:132113243-132113244(-) m6A 3'UTR       25456834//24981863//22608085
chr4:132113288-132113289(-) m6A 3'UTR       25456834//24981863//22608085
chr4:132113320-132113321(-) m6A 3'UTR       25456834//24981863//22608085
chr4:132113435-132113436(-) m6A 3'UTR       25456834//24981863//22608085
chr4:132113622-132113623(-) m6A CDS       25456834//24981863
chr4:132113674-132113675(-) m6A CDS       25456834//24981863
chr4:132113782-132113783(-) m6A CDS       25683224//24981863//22608085
chr4:132113887-132113888(-) m6A CDS       24981863

Interaction Network (The top 100 interactions):


Interactor1: mghv-miR-M1-2-3p
Interactor2: Oprd1

Evidence Support:


Prediction-Evidence cRep
Support Database RepTar

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