Detail Information

Basic Information:


  VIRBase ID:  

VHID00629776

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-1-3p:           Zfp345:      

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Interactor Information:


Interactor1 Interactor2
Symbol mghv-miR-M1-1-3p Zfp345
miRBase
Accession/Entrez ID
MIMAT0001564 545471
Organism Murid gammaherpesvirus 4 (MuHV-4) Mus musculus
Category miRNA mRNA
Alias - -

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Zfp345
chr2:150471573-150471574(-) m6A 3'UTR       25456834
chr2:150471580-150471581(-) m6A 3'UTR       25456834
chr2:150471616-150471617(-) m6A 3'UTR       25683224//25456834//25569111
chr2:150471650-150471651(-) m6A 3'UTR       25683224//25456834//25569111
chr2:150471667-150471668(-) m6A 3'UTR       25683224//25456834//25569111
chr2:150471680-150471681(-) m6A 3'UTR       25683224//25456834//25569111
chr2:150471734-150471735(-) m6A 3'UTR       25683224//25456834
chr2:150472065-150472066(-) m6A CDS       25456834
chr2:150472106-150472107(-) m6A CDS       25456834
chr2:150472123-150472124(-) m6A CDS       25456834
chr2:150472190-150472191(-) m6A CDS       25456834//25569111
chr2:150472207-150472208(-) m6A CDS       25456834//25569111
chr2:150472226-150472227(-) m6A CDS       25456834//25569111
chr2:150472274-150472275(-) m6A CDS       25456834
chr2:150472289-150472290(-) m6A CDS       25456834
chr2:150472343-150472344(-) m6A CDS       25456834
chr2:150472442-150472443(-) m6A CDS       -
chr2:150472469-150472470(-) m6A CDS       25456834
chr2:150472543-150472544(-) m6A CDS       25456834//25569111
chr2:150472556-150472557(-) m6A CDS       25456834//25569111
chr2:150472583-150472584(-) m6A CDS       25456834//25569111
chr2:150472640-150472641(-) m6A CDS       25569111
chr2:150472779-150472780(-) m6A CDS       25456834//25569111
chr2:150472808-150472809(-) m6A CDS       25456834//25569111
chr2:150472823-150472824(-) m6A CDS       25456834//25569111
chr2:150472892-150472893(-) m6A CDS       25456834
chr2:150472919-150472920(-) m6A CDS       25456834//25569111
chr2:150472978-150472979(-) m6A CDS       25456834//25569111
chr2:150472991-150472992(-) m6A CDS       25456834//25569111
chr2:150473006-150473007(-) m6A CDS       25456834//25569111
chr2:150473060-150473061(-) m6A CDS       25456834//25569111
chr2:150473077-150473078(-) m6A CDS       25456834//25569111
chr2:150473144-150473145(-) m6A CDS       25456834//25569111
chr2:150473200-150473201(-) m6A CDS       25456834//25569111
chr2:150473228-150473229(-) m6A CDS       25456834//25569111
chr2:150473245-150473246(-) m6A CDS       25456834//25569111
chr2:150473255-150473256(-) m6A CDS       25456834//25569111
chr2:150473314-150473315(-) m6A CDS       25456834//25569111
chr2:150473339-150473340(-) m6A CDS       25456834

Interaction Network (The top 100 interactions):


Interactor1: mghv-miR-M1-1-3p
Interactor2: Zfp345

Evidence Support:


Prediction-Evidence cRep//Rep
Support Database RepTar

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