Basic Information:

  VIRBase ID:  

VHID00629763

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-1-3p:  MIMAT0001564          Hdac1:  NM_008228     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-1-3p	Hdac1
miRBase Accession/Entrez ID	MIMAT0001564	433759
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	HD1//Hdac1-ps//MommeD//MommeD5//RP//RPD3

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Hdac1	chr4:129516498-129516499(-) m6A 3'UTR//exon       25456834 chr4:129516927-129516928(-) m6A CDS//exon       25683224//25412662//24981863//25456834 chr4:129517394-129517395(-) m6A CDS//exon       25683224//25412662//24981863//25456834 chr4:129517429-129517430(-) m6A CDS//exon       25683224//25412662//24981863//25456834 chr4:129517462-129517463(-) m6A CDS//exon       25683224//25412662//24981863 chr4:129517812-129517813(-) m6A CDS       25683224//25412662 chr4:129517905-129517906(-) m6A CDS       25683224//25569111 chr4:129518039-129518040(-) m6A CDS       24981863//25569111 chr4:129518086-129518087(-) m6A CDS//exon       25569111 chr4:129521472-129521473(-) m6A CDS//exon       24981863//22608085 chr4:129522369-129522370(-) m6A CDS//exon       24981863 chr4:129522376-129522377(-) m6A CDS//exon       24981863 chr4:129522426-129522427(-) m6A CDS//exon       24981863//25569111 chr4:129522570-129522571(-) m6A exon//intron       25569111 chr4:129522970-129522971(-) m6A CDS//exon       25683224//25569111 chr4:129523055-129523056(-) m6A CDS//exon       25683224//25569111//22608085 chr4:129523067-129523068(-) m6A CDS//exon       25683224//25569111//22608085 chr4:129534700-129534701(-) m6A CDS//exon       25456834//24981863//25569111 chr4:129534713-129534714(-) m6A CDS//exon       25456834//24981863//25569111 chr4:129542619-129542620(-) m6A CDS//exon       25456834//24981863//25569111 chr4:129542661-129542662(-) m6A 5'UTR//exon       25456834//24981863//25569111

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Hdac1	Exosome Mast cells     17486113

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-1-3p
Interactor2: Hdac1

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar