Basic Information:

  VIRBase ID:  

VHID00629672

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-1-3p:  MIMAT0001564          Ppm1e:  NM_177167     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-1-3p	Ppm1e
miRBase Accession/Entrez ID	MIMAT0001564	320472
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	AW049266//B930008A12Rik//mKIAA1072//PO//POPX1//PP2//PP2CH

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	Ppm1e	chr11:87155595(-) A-I      intronic chr11:87164557(-) A-I      intronic chr11:87155600(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	Ppm1e	chr11:87342093(-) A-I intron -    22524474 chr11:87342098(-) A-I intron -    22524474

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Ppm1e	chr11:87226967-87226968(-) m6A 3'UTR       25683224//24981863 chr11:87227034-87227035(-) m6A 3'UTR       25683224//25456834//24981863//22608085 chr11:87227091-87227092(-) m6A 3'UTR       25683224//25456834//24981863//26404942//22608085 chr11:87227239-87227240(-) m6A 3'UTR       25683224//25456834//24981863//26404942//22608085 chr11:87227272-87227273(-) m6A 3'UTR       25683224//25456834//24981863//26404942//22608085 chr11:87227304-87227305(-) m6A 3'UTR       25683224//25456834//24981863//26404942//22608085 chr11:87227356-87227357(-) m6A 3'UTR       25683224//25456834//24981863//26404942//22608085 chr11:87227412-87227413(-) m6A 3'UTR       25683224//25456834//24981863//26404942 chr11:87227426-87227427(-) m6A 3'UTR       25683224//25456834//24981863//26404942 chr11:87227490-87227491(-) m6A 3'UTR       24981863 chr11:87227551-87227552(-) m6A 3'UTR       25683224//24981863 chr11:87227634-87227635(-) m6A 3'UTR       25683224//24981863//26404942//22608085 chr11:87227642-87227643(-) m6A 3'UTR       25683224//24981863//26404942//22608085 chr11:87227673-87227674(-) m6A 3'UTR       25683224//24981863//26404942//22608085 chr11:87227714-87227715(-) m6A 3'UTR       25683224//24981863//26404942//22608085 chr11:87227812-87227813(-) m6A 3'UTR       25683224//24981863//26404942 chr11:87228866-87228867(-) m6A 3'UTR       25683224//22608085 chr11:87228874-87228875(-) m6A 3'UTR       25683224//22608085 chr11:87228880-87228881(-) m6A 3'UTR       25683224//22608085 chr11:87228894-87228895(-) m6A 3'UTR       25683224//22608085 chr11:87229013-87229014(-) m6A 3'UTR       25683224//22608085 chr11:87229023-87229024(-) m6A 3'UTR       25683224//22608085 chr11:87229036-87229037(-) m6A 3'UTR       25683224//22608085 chr11:87229054-87229055(-) m6A 3'UTR       25683224//22608085 chr11:87229290-87229291(-) m6A 3'UTR       25683224//22608085 chr11:87229347-87229348(-) m6A 3'UTR       25683224//22608085 chr11:87229353-87229354(-) m6A 3'UTR       25683224//22608085 chr11:87229400-87229401(-) m6A 3'UTR       25683224//22608085 chr11:87229433-87229434(-) m6A 3'UTR       25683224//22608085 chr11:87229668-87229669(-) m6A 3'UTR       25683224//22608085 chr11:87229804-87229805(-) m6A 3'UTR       25683224//22608085 chr11:87229833-87229834(-) m6A 3'UTR       25683224//22608085 chr11:87229902-87229903(-) m6A 3'UTR       25683224//22608085 chr11:87230031-87230032(-) m6A 3'UTR       25683224//22608085 chr11:87230364-87230365(-) m6A 3'UTR       25683224//24981863 chr11:87230412-87230413(-) m6A 3'UTR       25683224//24981863 chr11:87230475-87230476(-) m6A 3'UTR       25683224//24981863//22608085 chr11:87230524-87230525(-) m6A 3'UTR       25683224//22608085 chr11:87230640-87230641(-) m6A 3'UTR       25683224//22608085 chr11:87230810-87230811(-) m6A 3'UTR       25683224//24981863//26404942 chr11:87230819-87230820(-) m6A 3'UTR       25683224//24981863//26404942 chr11:87230877-87230878(-) m6A 3'UTR       25683224//24981863//26404942 chr11:87230904-87230905(-) m6A CDS       25683224//24981863//26404942 chr11:87231003-87231004(-) m6A CDS       25683224//24981863 chr11:87231157-87231158(-) m6A CDS       25683224//24981863//25569111//22608085 chr11:87231179-87231180(-) m6A CDS       25683224//24981863//25569111//22608085 chr11:87231213-87231214(-) m6A CDS       25683224//24981863//26404942//22608085 chr11:87231401-87231402(-) m6A CDS       25683224//25456834//24981863//22608085 chr11:87231435-87231436(-) m6A CDS       25683224//25456834//24981863//22608085 chr11:87231481-87231482(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr11:87231577-87231578(-) m6A CDS       25683224//25456834//24981863//25569111//26404942//22608085 chr11:87231621-87231622(-) m6A CDS       25683224//25456834//24981863//25569111//26404942//22608085 chr11:87231628-87231629(-) m6A CDS       25683224//25456834//24981863//25569111//26404942//22608085 chr11:87231663-87231664(-) m6A CDS       25683224//25456834//24981863//25569111//26404942//22608085 chr11:87231669-87231670(-) m6A CDS       25683224//25456834//24981863//25569111//26404942//22608085 chr11:87231759-87231760(-) m6A CDS       25683224//25456834//24981863//26404942//22608085 chr11:87231813-87231814(-) m6A CDS       25683224//25456834//24981863//26404942//22608085 chr11:87231855-87231856(-) m6A CDS       25683224//24981863//22608085 chr11:87231862-87231863(-) m6A CDS       25683224//24981863//22608085 chr11:87231888-87231889(-) m6A CDS       25683224//24981863//22608085 chr11:87237438-87237439(-) m6A CDS       25683224//24981863 chr11:87237452-87237453(-) m6A CDS       25683224//24981863 chr11:87237461-87237462(-) m6A CDS       25683224//24981863//22608085 chr11:87237559-87237560(-) m6A CDS       25683224//22608085 chr11:87240779-87240780(-) m6A CDS       25683224//22608085 chr11:87243102-87243103(-) m6A exon//intron       25683224//22608085 chr11:87243140-87243141(-) m6A exon//intron       25683224//22608085 chr11:87243170-87243171(-) m6A exon//intron       25683224//22608085 chr11:87244314-87244315(-) m6A CDS//exon       25683224//24981863 chr11:87244335-87244336(-) m6A CDS//exon       25683224//24981863 chr11:87244395-87244396(-) m6A CDS//exon       25683224//24981863//22608085 chr11:87244427-87244428(-) m6A CDS//exon       25683224//24981863//22608085 chr11:87244459-87244460(-) m6A CDS//exon       25683224//22608085 chr11:87248937-87248938(-) m6A CDS//exon       25683224//22608085 chr11:87358475-87358476(-) m6A CDS//exon       25683224//22608085 chr11:87358670-87358671(-) m6A CDS       24981863 chr11:87358676-87358677(-) m6A CDS       24981863 chr11:87358726-87358727(-) m6A CDS       24981863 chr11:87358801-87358802(-) m6A CDS       25683224//24981863//22608085 chr11:87358831-87358832(-) m6A CDS       25683224//24981863//22608085 chr11:87358875-87358876(-) m6A CDS       25683224//24981863 chr11:87358922-87358923(-) m6A 5'UTR       25683224//24981863

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-1-3p
Interactor2: Ppm1e

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar