Detail Information

Basic Information:


  VIRBase ID:  

VHID00629671

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-1-3p:           Cadps2:      

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Interactor Information:


Interactor1 Interactor2
Symbol mghv-miR-M1-1-3p Cadps2
miRBase
Accession/Entrez ID
MIMAT0001564 320405
Organism Murid gammaherpesvirus 4 (MuHV-4) Mus musculus
Category miRNA mRNA
Alias - A230044C21Rik//Ca//Caps-2//Caps2//cpd//Cpd2

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Cadps2
chr6:23263512-23263513(-) m6A 3'UTR//exon       24981863//22608085
chr6:23263567-23263568(-) m6A CDS//exon       24981863//22608085
chr6:23263590-23263591(-) m6A CDS//exon       24981863//22608085
chr6:23496780-23496781(-) m6A CDS       25683224//22608085
chr6:23496814-23496815(-) m6A CDS       25683224//22608085
chr6:23496820-23496821(-) m6A CDS       25683224//22608085
chr6:23496829-23496830(-) m6A CDS       25683224//22608085
chr6:23626739-23626740(-) m6A CDS//exon       25683224//24981863

Interaction Network (The top 100 interactions):


Interactor1: mghv-miR-M1-1-3p
Interactor2: Cadps2

Evidence Support:


Prediction-Evidence cRep//Rep
Support Database RepTar

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