Detail Information

Basic Information:


  VIRBase ID:  

VHID00629665

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-1-3p:           Senp5:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol mghv-miR-M1-1-3p Senp5
miRBase
Accession/Entrez ID		 MIMAT0001564 320213
Organism Murid gammaherpesvirus 4 (MuHV-4) Mus musculus
Category miRNA mRNA
Alias - 6230429P13Rik//A730063F07Rik//AI851888//BB189556//SMT3IP3

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR Senp5
chr16:31968056(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED Senp5
chr16:31967970(-) A-I intron -    22524474

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Senp5
chr16:31963358-31963359(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085
chr16:31963409-31963410(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085
chr16:31963424-31963425(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085
chr16:31963430-31963431(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085
chr16:31963487-31963488(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085
chr16:31965758-31965759(-) m6A 3'UTR//CDS       25456834//24981863//25569111
chr16:31965783-31965784(-) m6A 3'UTR//CDS       25456834//25569111
chr16:31970402-31970403(-) m6A intron       24981863//25412662//25569111
chr16:31970424-31970425(-) m6A intron       25412662//24981863//25569111
chr16:31970476-31970477(-) m6A intron       25683224//25412662//24981863//25569111
chr16:31970494-31970495(-) m6A intron       25683224//25412662//24981863//25569111
chr16:31970499-31970500(-) m6A intron       25683224//25412662//24981863//25569111
chr16:31970551-31970552(-) m6A intron       25683224//25412662//24981863//25569111
chr16:31970563-31970564(-) m6A intron       25683224//25412662//24981863//25569111
chr16:31970587-31970588(-) m6A intron       25683224//25412662//24981863//25569111
chr16:31970639-31970640(-) m6A intron       25683224//25412662//25569111
chr16:31970659-31970660(-) m6A intron       25683224//25412662//25569111
chr16:31970729-31970730(-) m6A intron       25569111
chr16:31987186-31987187(-) m6A intron       25569111
chr16:31987271-31987272(-) m6A intron       25412662//25569111
chr16:31988984-31988985(-) m6A CDS//exon       25412662//24981863//25569111
chr16:31989013-31989014(-) m6A CDS//exon       25456834//25412662//24981863//25569111
chr16:31989027-31989028(-) m6A CDS//exon       25456834//25412662//24981863//25569111
chr16:31989076-31989077(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085
chr16:31989136-31989137(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085
chr16:31989193-31989194(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr16:31989213-31989214(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085
chr16:31989242-31989243(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085
chr16:31989281-31989282(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085
chr16:31989312-31989313(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085
chr16:31989376-31989377(-) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085
chr16:31989442-31989443(-) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085//22575960
chr16:31989454-31989455(-) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085//22575960
chr16:31989487-31989488(-) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085//22575960
chr16:31989514-31989515(-) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085//22575960
chr16:31989520-31989521(-) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085//22575960
chr16:31989558-31989559(-) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085
chr16:31989613-31989614(-) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085
chr16:31989625-31989626(-) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085
chr16:31989741-31989742(-) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085
chr16:31989813-31989814(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085
chr16:31989820-31989821(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085
chr16:31989877-31989878(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085
chr16:31989890-31989891(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085
chr16:31989943-31989944(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085
chr16:31989958-31989959(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085
chr16:31989969-31989970(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085
chr16:31990000-31990001(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085
chr16:31990057-31990058(-) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085
chr16:31990098-31990099(-) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085
chr16:31990138-31990139(-) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085
chr16:31990188-31990189(-) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085
chr16:31990199-31990200(-) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085
chr16:31990232-31990233(-) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085
chr16:31990327-31990328(-) m6A CDS//exon       24981863//25569111
chr16:31990425-31990426(-) m6A CDS//exon       25569111
chr16:32003050-32003051(-) m6A 5'UTR//exon       25412662//25569111

Interaction Network (The top 100 interactions):


Interactor1: mghv-miR-M1-1-3p
Interactor2: Senp5

Evidence Support:


Prediction-Evidence cRep//Rep
Support Database RepTar

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