Basic Information:

  VIRBase ID:  

VHID00629655

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-1-3p:  MIMAT0001564          Zcchc7:  NM_138590     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-1-3p	Zcchc7
miRBase Accession/Entrez ID	MIMAT0001564	319885
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	4930572I07Rik//D4Wsu132//D4Wsu132e

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	Zcchc7	chr4:44929103(+) A-I      intronic chr4:44929119(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	Zcchc7	chr4:44916231(+) A-I intron -    22524474 chr4:44916247(+) A-I intron -    22524474

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Zcchc7	chr4:44761891-44761892(+) m6A CDS//exon       24981863//25569111//22608085 chr4:44761941-44761942(+) m6A CDS//exon       25456834//25412662//24981863//25569111//22608085 chr4:44762042-44762043(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr4:44762059-44762060(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr4:44762087-44762088(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr4:44762215-44762216(+) m6A CDS//exon       25456834//24981863//25569111//22608085 chr4:44762286-44762287(+) m6A CDS//exon       25456834//24981863//25569111//22608085 chr4:44762423-44762424(+) m6A CDS//exon       24981863//25569111//22608085 chr4:44762458-44762459(+) m6A CDS//exon       24981863//25569111 chr4:44929612-44929613(+) m6A CDS//intron       24981863 chr4:44931053-44931054(+) m6A 3'UTR//CDS//exon       24981863//22608085 chr4:44931075-44931076(+) m6A 3'UTR//CDS//exon       24981863//22608085 chr4:44931091-44931092(+) m6A 3'UTR//CDS//exon       24981863//22608085 chr4:44931172-44931173(+) m6A 3'UTR//CDS//exon       24981863//25456834//22608085 chr4:44931187-44931188(+) m6A 3'UTR//CDS//exon       24981863//25456834//22608085 chr4:44931248-44931249(+) m6A 3'UTR//CDS//exon       24981863//25456834//22608085 chr4:44931267-44931268(+) m6A 3'UTR//CDS//exon       24981863//25456834 chr4:44931579-44931580(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr4:44931632-44931633(+) m6A 3'UTR       25456834//24981863//25569111//22608085 chr4:44931663-44931664(+) m6A 3'UTR       25456834//24981863//25569111//22608085 chr4:44931727-44931728(+) m6A 3'UTR       25456834//24981863//25569111//22608085 chr4:44931797-44931798(+) m6A 3'UTR       25683224//25456834//24981863//25412662//25569111//22608085 chr4:44931873-44931874(+) m6A 3'UTR       25683224//25456834//24981863//25412662//25569111//22608085 chr4:44931928-44931929(+) m6A 3'UTR       25683224//25456834//24981863//25412662//25569111//22608085 chr4:44931945-44931946(+) m6A 3'UTR       25683224//25456834//24981863//25412662//25569111//22608085 chr4:44931999-44932000(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr4:44932019-44932020(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr4:44932057-44932058(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr4:44932105-44932106(+) m6A 3'UTR       25456834//25412662//24981863//25569111//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Zcchc7	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-1-3p
Interactor2: Zcchc7

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar