Detail Information

Basic Information:


  VIRBase ID:  

VHID00629545

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-1-3p:           Zfp933:      

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Interactor Information:


Interactor1 Interactor2
Symbol mghv-miR-M1-1-3p Zfp933
miRBase
Accession/Entrez ID		 MIMAT0001564 242747
Organism Murid gammaherpesvirus 4 (MuHV-4) Mus musculus
Category miRNA mRNA
Alias - 2810408P10Rik

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR Zfp933
chr4:147197367(-) A-I      3'UTR
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED Zfp933
chr4:147823258(-) A-I exon 3'UTR    22524474

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Zfp933
chr4:147824319-147824320(-) m6A 3'UTR       25456834//24981863
chr4:147824359-147824360(-) m6A 3'UTR       25456834//24981863//25569111
chr4:147824385-147824386(-) m6A 3'UTR       25456834//24981863//25569111
chr4:147825438-147825439(-) m6A 3'UTR       24981863//25412662//25569111//22608085
chr4:147825526-147825527(-) m6A 3'UTR       25456834//25412662//24981863//25569111//22608085
chr4:147825562-147825563(-) m6A 3'UTR       25456834//25412662//24981863//25569111//22608085
chr4:147825655-147825656(-) m6A 3'UTR       24981863//22608085
chr4:147825742-147825743(-) m6A CDS       24981863//25456834//25569111//22608085
chr4:147825785-147825786(-) m6A CDS       24981863//25456834//25569111//22608085
chr4:147825826-147825827(-) m6A CDS       25456834//24981863//25569111//22608085
chr4:147825853-147825854(-) m6A CDS       25456834//24981863//25569111//22608085
chr4:147825910-147825911(-) m6A CDS       25456834//24981863//22608085
chr4:147825927-147825928(-) m6A CDS       25456834//24981863//22608085
chr4:147825994-147825995(-) m6A CDS       24981863//22608085
chr4:147826121-147826122(-) m6A CDS       25456834//24981863//22608085
chr4:147826162-147826163(-) m6A CDS       25456834//24981863//25569111//22608085
chr4:147826179-147826180(-) m6A CDS       25456834//24981863//25569111//22608085
chr4:147826330-147826331(-) m6A CDS       24981863//25569111//22608085
chr4:147826347-147826348(-) m6A CDS       24981863//25456834//25569111//22608085
chr4:147826414-147826415(-) m6A CDS       24981863//25456834//25569111//22608085
chr4:147826457-147826458(-) m6A CDS       24981863//25456834//25569111//22608085
chr4:147826582-147826583(-) m6A CDS       25456834//24981863//25569111//22608085
chr4:147826599-147826600(-) m6A CDS       25456834//24981863//25569111//22608085
chr4:147826666-147826667(-) m6A CDS       25456834//24981863//25569111//22608085
chr4:147826683-147826684(-) m6A CDS       25456834//24981863//25569111//22608085
chr4:147826693-147826694(-) m6A CDS       25456834//24981863//25569111//22608085
chr4:147826750-147826751(-) m6A CDS       24981863//22608085
chr4:147826805-147826806(-) m6A CDS       24981863//22608085
chr4:147826834-147826835(-) m6A CDS       24981863//22608085
chr4:147828764-147828765(-) m6A 5'UTR//CDS       24981863

Interaction Network (The top 100 interactions):


Interactor1: mghv-miR-M1-1-3p
Interactor2: Zfp933

Evidence Support:


Prediction-Evidence cRep//Rep
Support Database RepTar

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