Basic Information:

  VIRBase ID:  

VHID00629498

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-1-3p:  MIMAT0001564          Cdk17:  NM_146239     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-1-3p	Cdk17
miRBase Accession/Entrez ID	MIMAT0001564	237459
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	6430598J10Rik//Pctk//Pctk2

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Cdk17	chr10:93161135-93161136(+) m6A 5'UTR       25412662//25569111//22608085 chr10:93208181-93208182(+) m6A 5'UTR       25683224//25412662//22608085 chr10:93208220-93208221(+) m6A CDS       25683224//25412662//22608085 chr10:93208312-93208313(+) m6A CDS       25683224//25412662//24981863//22608085 chr10:93224970-93224971(+) m6A CDS       22608085 chr10:93225012-93225013(+) m6A CDS       22608085 chr10:93239007-93239008(+) m6A CDS       25456834//24981863//25569111//22608085 chr10:93239022-93239023(+) m6A CDS       25456834//24981863//25569111//22608085 chr10:93239039-93239040(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr10:93239599-93239600(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr10:93239606-93239607(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr10:93239676-93239677(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr10:93239710-93239711(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr10:93239718-93239719(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr10:93239768-93239769(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr10:93239905-93239906(+) m6A 3'UTR       25683224//24981863//25569111//22608085 chr10:93239913-93239914(+) m6A 3'UTR       25683224//24981863//25569111//22608085 chr10:93240540-93240541(+) m6A 3'UTR       24981863//25412662//22608085 chr10:93240560-93240561(+) m6A 3'UTR       24981863//25412662//22608085 chr10:93240655-93240656(+) m6A 3'UTR       24981863//26404942 chr10:93240664-93240665(+) m6A 3'UTR       24981863//26404942 chr10:93240702-93240703(+) m6A 3'UTR       24981863//26404942 chr10:93240739-93240740(+) m6A 3'UTR       24981863//26404942 chr10:93240748-93240749(+) m6A 3'UTR       24981863//26404942 chr10:93240798-93240799(+) m6A 3'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Cdk17	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-1-3p
Interactor2: Cdk17

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar