Basic Information:

  VIRBase ID:  

VHID00629453

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-1-3p:  MIMAT0001564          Klhl42:  NM_001081237     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-1-3p	Klhl42
miRBase Accession/Entrez ID	MIMAT0001564	232539
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	A330079N23Rik//AI450355//C230080I20Rik//Ctb9//Klhdc//Klhdc5//mKIAA1340

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Klhl42	chr6:147091568-147091569(+) m6A CDS       25412662//24981863//25569111 chr6:147091605-147091606(+) m6A CDS       25412662//24981863//25569111 chr6:147091727-147091728(+) m6A CDS       25412662//24981863//25569111 chr6:147091917-147091918(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr6:147092027-147092028(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr6:147092071-147092072(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr6:147092096-147092097(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr6:147092109-147092110(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr6:147092139-147092140(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr6:147092167-147092168(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr6:147092249-147092250(+) m6A CDS       25683224//24981863//25569111 chr6:147092357-147092358(+) m6A CDS       24981863//25569111 chr6:147101577-147101578(+) m6A CDS       25569111 chr6:147101687-147101688(+) m6A CDS       25683224//25569111//22608085 chr6:147107706-147107707(+) m6A CDS//exon       25683224//24981863//25569111 chr6:147107753-147107754(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr6:147107801-147107802(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr6:147107833-147107834(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr6:147107868-147107869(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr6:147107928-147107929(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr6:147107949-147107950(+) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr6:147108094-147108095(+) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085 chr6:147108140-147108141(+) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085 chr6:147108224-147108225(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr6:147108285-147108286(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr6:147108300-147108301(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr6:147108315-147108316(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr6:147108372-147108373(+) m6A 3'UTR       25456834//24981863//25569111 chr6:147108396-147108397(+) m6A 3'UTR       25456834//24981863//25569111 chr6:147108411-147108412(+) m6A 3'UTR       25456834//24981863//25569111 chr6:147108424-147108425(+) m6A 3'UTR       25456834//24981863//25569111 chr6:147108443-147108444(+) m6A 3'UTR       25456834//25569111 chr6:147108615-147108616(+) m6A 3'UTR       24981863//25569111 chr6:147108740-147108741(+) Y 3'UTR//exon       26075521 chr6:147109370-147109371(+) m6A 3'UTR//intron       25569111 chr6:147109458-147109459(+) m6A 3'UTR//intron       25456834//24981863//25569111 chr6:147109491-147109492(+) m6A 3'UTR//intron       25456834//24981863//25569111 chr6:147109499-147109500(+) m6A 3'UTR//intron       25456834//24981863//25569111 chr6:147109641-147109642(+) m6A 3'UTR//intron       25456834//24981863//25569111 chr6:147109646-147109647(+) m6A 3'UTR//intron       25456834//24981863//25569111 chr6:147109707-147109708(+) m6A 3'UTR//intron       25456834//24981863//25569111//22608085 chr6:147110392-147110393(+) m6A 3'UTR       25456834//24981863//25569111 chr6:147110415-147110416(+) m6A 3'UTR       25456834//24981863//25569111 chr6:147110511-147110512(+) m6A 3'UTR       25456834//24981863//25569111 chr6:147110545-147110546(+) m6A 3'UTR       25456834//24981863//25569111//22608085 chr6:147110643-147110644(+) m6A 3'UTR       24981863//25569111 chr6:147110708-147110709(+) m6A 3'UTR       24981863 chr6:147111076-147111077(+) m6A 3'UTR       24981863//25569111//22608085 chr6:147111091-147111092(+) m6A 3'UTR       24981863//25569111//22608085 chr6:147111148-147111149(+) m6A 3'UTR       24981863//25569111 chr6:147111197-147111198(+) m6A 3'UTR       24981863//22608085 chr6:147111207-147111208(+) m6A 3'UTR       24981863//22608085 chr6:147112149-147112150(+) m6A 3'UTR       24981863 chr6:147112165-147112166(+) m6A 3'UTR       24981863 chr6:147112292-147112293(+) m6A 3'UTR       24981863//25569111

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Klhl42	Exosome Mast cells     17486113

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-1-3p
Interactor2: Klhl42

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar