Basic Information:

  VIRBase ID:  

VHID00629447

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-1-3p:  MIMAT0001564          Zfp12:  NM_001289589     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-1-3p	Zfp12
miRBase Accession/Entrez ID	MIMAT0001564	231866
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	C530015C18//Krox//Krox-7//Zfp-1//Zfp-12//Znf12

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Zfp12	chr5:143235354-143235355(+) m6A 5'UTR       25412662 chr5:143240014-143240015(+) m6A CDS       25683224//22608085 chr5:143240055-143240056(+) m6A CDS//exon       25683224//22608085 chr5:143240335-143240336(+) m6A 3'UTR//CDS//exon//intron       25683224//22608085 chr5:143240359-143240360(+) m6A 3'UTR//CDS//exon//intron       25683224//24981863//22608085 chr5:143244097-143244098(+) m6A 3'UTR//CDS//exon       24981863//22608085 chr5:143244115-143244116(+) m6A 3'UTR//CDS//exon       24981863//22608085 chr5:143244186-143244187(+) m6A 3'UTR//CDS//exon       25683224//25412662//24981863//25569111 chr5:143244290-143244291(+) m6A 3'UTR//CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr5:143244351-143244352(+) m6A 3'UTR//CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr5:143244400-143244401(+) m6A 3'UTR//CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr5:143244568-143244569(+) m6A 3'UTR//CDS//exon       25412662//24981863//25569111 chr5:143244672-143244673(+) m6A 3'UTR//CDS       25683224//25412662//24981863//25569111 chr5:143244801-143244802(+) m6A 3'UTR//CDS       25683224//25412662//24981863//25569111 chr5:143244840-143244841(+) m6A 3'UTR//CDS       25683224//25412662//24981863//25569111 chr5:143245025-143245026(+) m6A 3'UTR//CDS       25683224//25412662//24981863//25569111 chr5:143245176-143245177(+) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr5:143245234-143245235(+) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr5:143245250-143245251(+) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr5:143245344-143245345(+) m6A 3'UTR//CDS       25456834//25412662//24981863//25569111//22608085 chr5:143245389-143245390(+) m6A 3'UTR//CDS       25412662//24981863//25569111//22608085 chr5:143245418-143245419(+) m6A 3'UTR//CDS       25412662//24981863//25569111 chr5:143245570-143245571(+) m6A 3'UTR//CDS       25412662//24981863//25569111 chr5:143245586-143245587(+) m6A 3'UTR//CDS       25412662//24981863//25569111 chr5:143245764-143245765(+) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr5:143245848-143245849(+) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr5:143245909-143245910(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr5:143245934-143245935(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr5:143246014-143246015(+) m6A 3'UTR       25456834//25412662//24981863//25569111//22608085 chr5:143246240-143246241(+) m6A 3'UTR       25683224//24981863//25569111//22608085 chr5:143246329-143246330(+) m6A 3'UTR       25456834//24981863//25569111//22608085 chr5:143246395-143246396(+) Y 3'UTR//exon       26075521 chr5:143246419-143246420(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr5:143246434-143246435(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr5:143246494-143246495(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr5:143246656-143246657(+) m6A 3'UTR       25456834//24981863//25569111//22608085 chr5:143246794-143246795(+) m6A 3'UTR       24981863//25456834//22608085 chr5:143246998-143246999(+) m6A 3'UTR       - chr5:143247133-143247134(+) m6A 3'UTR       25456834//24981863 chr5:143247154-143247155(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr5:143247219-143247220(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr5:143247224-143247225(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr5:143247294-143247295(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr5:143247381-143247382(+) m6A 3'UTR       25683224//24981863//25569111//22608085 chr5:143247391-143247392(+) m6A 3'UTR       25683224//24981863//25569111//22608085 chr5:143247515-143247516(+) m6A 3'UTR       25412662//24981863//25569111//22608085 chr5:143247522-143247523(+) m6A 3'UTR       25412662//24981863//25569111//22608085 chr5:143247592-143247593(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr5:143247725-143247726(+) m6A 3'UTR       25683224//25456834//24981863//25412662//25569111//22608085//22575960 chr5:143247757-143247758(+) m6A 3'UTR       25683224//25456834//24981863//25412662//25569111//22608085//22575960 chr5:143247768-143247769(+) m6A 3'UTR       25683224//25456834//24981863//25412662//25569111//22608085//22575960 chr5:143247784-143247785(+) m6A 3'UTR       25683224//25456834//24981863//25412662//25569111//22608085//22575960 chr5:143247806-143247807(+) m6A 3'UTR       25683224//25456834//24981863//25412662//25569111//22608085//22575960 chr5:143247945-143247946(+) m6A 3'UTR       25456834 chr5:143247952-143247953(+) m6A 3'UTR       25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Zfp12	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-1-3p
Interactor2: Zfp12

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar