Detail Information

Basic Information:


  VIRBase ID:  

VHID00629439

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-1-3p:           Ajap1:      

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Interactor Information:


Interactor1 Interactor2
Symbol mghv-miR-M1-1-3p Ajap1
miRBase
Accession/Entrez ID
MIMAT0001564 230959
Organism Murid gammaherpesvirus 4 (MuHV-4) Mus musculus
Category miRNA mRNA
Alias - Gm573

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Ajap1
chr4:153373264-153373265(-) m6A 3'UTR       24981863//22608085
chr4:153373269-153373270(-) m6A 3'UTR       24981863//22608085
chr4:153373292-153373293(-) m6A 3'UTR       24981863//22608085
chr4:153373321-153373322(-) m6A 3'UTR       24981863//22608085
chr4:153373498-153373499(-) m6A 3'UTR       24981863//22608085
chr4:153373549-153373550(-) m6A 3'UTR       24981863//22608085
chr4:153373903-153373904(-) m6A 3'UTR       25683224//24981863//22608085
chr4:153373929-153373930(-) m6A 3'UTR       25683224//24981863//22608085
chr4:153373998-153373999(-) m6A 3'UTR       25683224//24981863//22608085
chr4:153374017-153374018(-) m6A 3'UTR       25683224//24981863//22608085
chr4:153374036-153374037(-) m6A 3'UTR       25683224//24981863//22608085
chr4:153374043-153374044(-) m6A 3'UTR       25683224//24981863//22608085
chr4:153374077-153374078(-) m6A 3'UTR       25683224//24981863//22608085
chr4:153374092-153374093(-) m6A 3'UTR       25683224//24981863//22608085
chr4:153374181-153374182(-) m6A 3'UTR       24981863//22608085
chr4:153374196-153374197(-) m6A 3'UTR       24981863//22608085
chr4:153374246-153374247(-) m6A 3'UTR       24981863
chr4:153374252-153374253(-) m6A 3'UTR       24981863
chr4:153374258-153374259(-) m6A 3'UTR       24981863
chr4:153374274-153374275(-) m6A 3'UTR       24981863
chr4:153374279-153374280(-) m6A 3'UTR       24981863
chr4:153374287-153374288(-) m6A 3'UTR       24981863
chr4:153374292-153374293(-) m6A 3'UTR       24981863
chr4:153432179-153432180(-) m6A CDS//intron       25683224//24981863
chr4:153432242-153432243(-) m6A CDS//intron       24981863
chr4:153432251-153432252(-) m6A CDS//intron       24981863
chr4:153432350-153432351(-) m6A CDS//intron       25683224//24981863//22608085
chr4:153432531-153432532(-) m6A CDS//intron       25683224//25456834//24981863//22608085
chr4:153432543-153432544(-) m6A CDS//intron       25683224//25456834//24981863//22608085
chr4:153432562-153432563(-) m6A CDS//intron       25683224//25456834//24981863//22608085
chr4:153432596-153432597(-) m6A CDS//intron       25683224//25456834//24981863//22608085
chr4:153432612-153432613(-) m6A CDS//intron       25683224//25456834//24981863//22608085
chr4:153432678-153432679(-) m6A CDS//intron       25683224//25456834//24981863//22608085
chr4:153482133-153482134(-) m6A CDS       25683224//24981863

Interaction Network (The top 100 interactions):


Interactor1: mghv-miR-M1-1-3p
Interactor2: Ajap1

Evidence Support:


Prediction-Evidence cRep
Support Database RepTar

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