Basic Information:

  VIRBase ID:  

VHID00629336

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-1-3p:  MIMAT0001564          Nup153:  NM_175749     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-1-3p	Nup153
miRBase Accession/Entrez ID	MIMAT0001564	218210
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	B130015D15Rik//C88147

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Nup153	chr13:46680634-46680635(-) m6A 3'UTR       - chr13:46680840-46680841(-) m6A 3'UTR       25456834//24981863//25569111//26404942 chr13:46680930-46680931(-) m6A 3'UTR       25456834//24981863//25569111//22608085 chr13:46680959-46680960(-) m6A 3'UTR       25456834//24981863//25569111//22608085 chr13:46681047-46681048(-) m6A 3'UTR       25456834//24981863//25569111//22608085 chr13:46681180-46681181(-) m6A CDS//exon       25456834//24981863//25569111//22608085 chr13:46681207-46681208(-) m6A CDS//exon       25456834//24981863//25569111//22608085 chr13:46681643-46681644(-) m6A CDS//exon       25569111//22608085 chr13:46684093-46684094(-) m6A CDS       - chr13:46684199-46684200(-) m6A CDS       25569111 chr13:46686637-46686638(-) m6A CDS       25569111 chr13:46686695-46686696(-) m6A CDS       25412662//24981863//25569111 chr13:46686742-46686743(-) m6A CDS       25683224//25412662//24981863//25569111 chr13:46686836-46686837(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr13:46686845-46686846(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr13:46686856-46686857(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr13:46686964-46686965(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr13:46687002-46687003(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr13:46687009-46687010(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr13:46687032-46687033(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr13:46687259-46687260(-) m6A CDS       25456834//25412662//24981863//25569111//26404942//22608085 chr13:46687290-46687291(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//26404942//22608085 chr13:46687301-46687302(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//26404942//22608085 chr13:46687317-46687318(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//26404942//22608085//22575960 chr13:46687332-46687333(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//26404942//22608085//22575960 chr13:46687414-46687415(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr13:46687489-46687490(-) m6A CDS       25683224//25456834//24981863//25569111 chr13:46689117-46689118(-) m6A CDS       25683224//25569111 chr13:46689150-46689151(-) m6A CDS       25683224//25569111 chr13:46689180-46689181(-) m6A CDS       25683224//25569111 chr13:46693515-46693516(-) m6A CDS       25683224//24981863//25569111 chr13:46693546-46693547(-) m6A CDS       25683224//24981863//25569111 chr13:46693727-46693728(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr13:46693793-46693794(-) m6A CDS       25683224//25456834//24981863//25569111//22608085//22575960 chr13:46693806-46693807(-) m6A CDS       25683224//25456834//24981863//25569111//22608085//22575960 chr13:46693829-46693830(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//26404942//22608085//22575960 chr13:46693848-46693849(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//26404942//22608085//22575960 chr13:46693868-46693869(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//26404942//22608085//22575960 chr13:46693874-46693875(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//26404942//22608085//22575960 chr13:46693884-46693885(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//26404942//22608085//22575960 chr13:46693892-46693893(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//26404942//22608085//22575960 chr13:46693908-46693909(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//26404942//22608085//22575960 chr13:46693939-46693940(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//26404942//22608085//22575960 chr13:46693951-46693952(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//26404942//22608085//22575960 chr13:46694046-46694047(-) m6A CDS       25456834//24981863//25569111//22608085 chr13:46696651-46696652(-) m6A CDS       25569111 chr13:46696662-46696663(-) m6A CDS       25569111 chr13:46701607-46701608(-) m6A CDS//exon       24981863//22608085 chr13:46705188-46705189(-) m6A CDS       24981863 chr13:46707750-46707751(-) m6A CDS       24981863 chr13:46707775-46707776(-) m6A CDS       24981863 chr13:46707809-46707810(-) m6A CDS       24981863//22608085 chr13:46707823-46707824(-) m6A CDS       24981863//22608085 chr13:46707863-46707864(-) m6A CDS       24981863//22608085 chr13:46707888-46707889(-) m6A CDS       25569111//22608085 chr13:46717150-46717151(-) m6A CDS//exon       - chr13:46717156-46717157(-) m6A CDS//exon       - chr13:46727418-46727419(-) m6A CDS       24981863//25569111 chr13:46727700-46727701(-) m6A 5'UTR       25683224//25456834//25412662//24981863//25569111 chr13:46727828-46727829(-) m6A 5'UTR       25683224//25456834//25412662//24981863//25569111

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Nup153	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-1-3p
Interactor2: Nup153

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar