Detail Information

Basic Information:


  VIRBase ID:  

VHID00629160

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-1-3p:           Nusap1:      

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Interactor Information:


Interactor1 Interactor2
Symbol mghv-miR-M1-1-3p Nusap1
miRBase
Accession/Entrez ID
MIMAT0001564 108907
Organism Murid gammaherpesvirus 4 (MuHV-4) Mus musculus
Category miRNA mRNA
Alias - 2610201A12Rik//AI481307//ANKT//AW547774//BB165529//BM037//LNP//N//NuSAP//Q0310//SAPL

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Nusap1
chr2:119618316-119618317(+) m6A 5'UTR       25569111
chr2:119618325-119618326(+) m6A 5'UTR       25569111
chr2:119618340-119618341(+) m6A 5'UTR       25456834//25569111
chr2:119618437-119618438(+) m6A 5'UTR       25456834//24981863//25569111
chr2:119618534-119618535(+) m6A 5'UTR       25456834//24981863
chr2:119618830-119618831(+) m6A CDS//exon       -
chr2:119624121-119624122(+) m6A CDS//exon//intron       -
chr2:119624162-119624163(+) m6A CDS//exon//intron       24981863
chr2:119627573-119627574(+) m6A CDS//exon//intron       25412662//24981863
chr2:119627666-119627667(+) m6A CDS//exon//intron       25683224//25412662//24981863
chr2:119630369-119630370(+) m6A CDS//exon//intron       25683224//25412662//24981863
chr2:119630415-119630416(+) m6A CDS//exon//intron       25683224//25412662//24981863
chr2:119633780-119633781(+) m6A CDS//intron       24981863
chr2:119633788-119633789(+) m6A CDS//intron       24981863
chr2:119633799-119633800(+) m6A CDS//intron       24981863
chr2:119647169-119647170(+) m6A CDS       25412662
chr2:119647177-119647178(+) m6A CDS       25412662
chr2:119647193-119647194(+) m6A CDS       25412662
chr2:119648910-119648911(+) m6A CDS       25412662
chr2:119648963-119648964(+) m6A CDS       25412662

Interaction Network (The top 100 interactions):


Interactor1: mghv-miR-M1-1-3p
Interactor2: Nusap1

Evidence Support:


Prediction-Evidence cRep
Support Database RepTar

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