Detail Information

Basic Information:


  VIRBase ID:  

VHID00629060

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-1-3p:           Sirt1:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol mghv-miR-M1-1-3p Sirt1
miRBase
Accession/Entrez ID		 MIMAT0001564 93759
Organism Murid gammaherpesvirus 4 (MuHV-4) Mus musculus
Category miRNA mRNA
Alias - AA673258//S//Si//Sir2//Sir2a//Sir2alpha//SIR2L1

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Sirt1
chr10:63320512-63320513(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085
chr10:63320544-63320545(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960
chr10:63320550-63320551(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960
chr10:63320586-63320587(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960
chr10:63320645-63320646(-) m6A 3'UTR//CDS       25683224//25456834//24981863//25569111//22608085//22575960
chr10:63320657-63320658(-) m6A 3'UTR//CDS       25683224//25456834//24981863//25569111//22608085//22575960
chr10:63320677-63320678(-) m6A 3'UTR//CDS       25683224//25456834//24981863//25569111//22608085//22575960
chr10:63320818-63320819(-) m6A 3'UTR//CDS       25683224//25456834//24981863//25569111//22608085
chr10:63320900-63320901(-) m6A 3'UTR//CDS       25683224//25456834//24981863//25569111//22608085
chr10:63321782-63321783(-) m6A 3'UTR//CDS//intron       25683224//25456834//24981863//25569111//22608085
chr10:63321808-63321809(-) m6A 3'UTR//CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085
chr10:63321823-63321824(-) m6A 3'UTR//CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085
chr10:63321837-63321838(-) m6A 3'UTR//CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085
chr10:63321888-63321889(-) m6A 3'UTR//CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085
chr10:63321907-63321908(-) m6A 3'UTR//CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085
chr10:63321923-63321924(-) m6A 3'UTR//CDS//intron       25683224//25456834//24981863//25569111//22608085
chr10:63321975-63321976(-) m6A 3'UTR//CDS//intron       25683224//25456834//24981863//25569111//22608085
chr10:63321987-63321988(-) m6A 3'UTR//CDS//intron       25683224//25456834//24981863//25569111//22608085
chr10:63322014-63322015(-) m6A 3'UTR//CDS//intron       25456834//24981863//25569111//22608085
chr10:63322027-63322028(-) m6A 3'UTR//CDS//intron       25456834//24981863//25569111//22608085
chr10:63322047-63322048(-) m6A 3'UTR//CDS//intron       25456834//24981863//25569111//22608085
chr10:63322118-63322119(-) m6A 3'UTR//CDS//intron       25456834//24981863//25569111
chr10:63322160-63322161(-) m6A 3'UTR//CDS//exon//intron       25456834//24981863//25569111
chr10:63322215-63322216(-) m6A 3'UTR//CDS//exon//intron       25456834//24981863//25569111
chr10:63322256-63322257(-) m6A 3'UTR//CDS//exon//intron       24981863//25569111
chr10:63331811-63331812(-) m6A CDS//exon       25412662//22608085
chr10:63331820-63331821(-) m6A CDS//exon       25412662//22608085
chr10:63331829-63331830(-) m6A CDS//exon       25412662//22608085
chr10:63337073-63337074(-) m6A CDS//intron       25412662
chr10:63338680-63338681(-) m6A CDS       25412662//24981863//25569111

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate Sirt1
Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):


Interactor1: mghv-miR-M1-1-3p
Interactor2: Sirt1

Evidence Support:


Prediction-Evidence Rep
Support Database RepTar

Starting a new search, please wait ...